Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm25879-201ENSMUST00000104330 107 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm12571-201ENSMUST00000118132 243 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm6071-201ENSMUST00000119561 440 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm23466-201ENSMUST00000157133 106 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm22036-201ENSMUST00000157279 215 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm23331-201ENSMUST00000157423 108 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm25914-201ENSMUST00000157618 153 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm26373-201ENSMUST00000157833 103 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm22537-201ENSMUST00000158172 199 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm24730-201ENSMUST00000158228 117 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm27445-201ENSMUST00000184484 72 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm27457-201ENSMUST00000184771 156 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Trbv6-201ENSMUST00000193743 276 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm18341-201ENSMUST00000197538 622 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm44054-201ENSMUST00000203814 372 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm38235-201ENSMUST00000194600 4952 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm5396-201ENSMUST00000121222 532 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm25447-201ENSMUST00000158997 128 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm28650-201ENSMUST00000188413 411 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm20144-201ENSMUST00000203031 165 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm44520-201ENSMUST00000205447 802 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm6796-201ENSMUST00000211919 243 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm17779-201ENSMUST00000213395 394 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm3338-201ENSMUST00000220982 269 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm25081-201ENSMUST00000082534 108 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm24204-201ENSMUST00000082950 107 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.94□□□□□ -1.78
Ccdc9bA3KGF9 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm26018-201ENSMUST00000104406 128 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm13355-201ENSMUST00000117996 317 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm12934-201ENSMUST00000119221 343 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm25543-201ENSMUST00000122678 312 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm22217-201ENSMUST00000157556 313 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm22215-201ENSMUST00000157558 96 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Mir1967-201ENSMUST00000157789 82 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm23554-201ENSMUST00000157818 110 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm43193-201ENSMUST00000197732 441 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm44389-201ENSMUST00000203795 182 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Snord14d-201ENSMUST00000083424 86 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ccdc9bA3KGF9 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm13386-201ENSMUST00000117677 124 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm24505-201ENSMUST00000157682 126 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm17166-201ENSMUST00000172006 431 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm27851-201ENSMUST00000183529 63 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm27718-201ENSMUST00000183721 86 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm27285-201ENSMUST00000183875 127 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm27761-201ENSMUST00000184091 131 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm29104-201ENSMUST00000186304 222 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm18429-201ENSMUST00000198707 421 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Gm26495-201ENSMUST00000083152 137 ntBASIC3.92□□□□□ -1.78
Ccdc9bA3KGF9 Mir132-201ENSMUST00000083603 66 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms