Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm25897-201ENSMUST00000083709 107 ntBASIC0.97□□□□□ -2.25
Col6a4A2AX52 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC0.96□□□□□ -2.26
Col6a4A2AX52 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC0.96□□□□□ -2.26
Col6a4A2AX52 Mup-ps1-201ENSMUST00000120720 544 ntBASIC0.96□□□□□ -2.26
Col6a4A2AX52 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.96□□□□□ -2.26
Col6a4A2AX52 Gm25321-201ENSMUST00000122558 102 ntBASIC0.96□□□□□ -2.26
Col6a4A2AX52 Mup-ps11-201ENSMUST00000178040 545 ntBASIC0.96□□□□□ -2.26
Col6a4A2AX52 Mup-ps3-201ENSMUST00000178315 545 ntBASIC0.96□□□□□ -2.26
Col6a4A2AX52 Mup-ps8-201ENSMUST00000178663 545 ntBASIC0.96□□□□□ -2.26
Col6a4A2AX52 Mup-ps6-201ENSMUST00000179564 545 ntBASIC0.96□□□□□ -2.26
Col6a4A2AX52 Gm29513-201ENSMUST00000185741 202 ntBASIC0.96□□□□□ -2.26
Col6a4A2AX52 Gm19118-201ENSMUST00000222554 98 ntBASIC0.96□□□□□ -2.26
Col6a4A2AX52 Gm43216-201ENSMUST00000196295 1333 ntBASIC0.96□□□□□ -2.26
Col6a4A2AX52 Gm23126-201ENSMUST00000104260 134 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm15176-201ENSMUST00000117734 135 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm14517-201ENSMUST00000119040 337 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm14651-201ENSMUST00000147192 442 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm23324-201ENSMUST00000157421 131 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm24854-201ENSMUST00000158025 98 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm2930-201ENSMUST00000170403 474 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm24086-201ENSMUST00000175171 98 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm11395-201ENSMUST00000181011 499 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Mir6402-201ENSMUST00000183406 80 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm37005-201ENSMUST00000193281 1164 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Mir219b-201ENSMUST00000198317 65 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 CU062626.2-201ENSMUST00000223953 274 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm25495-201ENSMUST00000104431 131 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm24555-201ENSMUST00000104548 124 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm14669-201ENSMUST00000118841 250 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm11785-201ENSMUST00000120165 601 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm12368-201ENSMUST00000122251 434 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm23587-201ENSMUST00000157658 84 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm20794-201ENSMUST00000177626 628 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm28356-202ENSMUST00000187566 858 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm20885-201ENSMUST00000190192 654 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm33571-201ENSMUST00000193271 657 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm36866-201ENSMUST00000193343 657 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm36047-201ENSMUST00000193659 657 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm20857-201ENSMUST00000194766 657 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm20858-201ENSMUST00000195459 657 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Gm30638-201ENSMUST00000195570 656 ntBASIC0.95□□□□□ -2.26
Col6a4A2AX52 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Col6a4A2AX52 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm15692-201ENSMUST00000152173 352 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm22769-201ENSMUST00000158367 98 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm25633-201ENSMUST00000178565 107 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Mir7215-201ENSMUST00000200383 51 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 AC105958.2-201ENSMUST00000214167 191 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Col6a4A2AX52 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm13343-201ENSMUST00000116474 105 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm14894-201ENSMUST00000117170 270 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm12191-201ENSMUST00000118307 348 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm23473-201ENSMUST00000158883 116 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Col6a4A2AX52 Mir6372-201ENSMUST00000185114 109 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm28825-201ENSMUST00000186233 238 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm28862-201ENSMUST00000188246 163 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm28437-201ENSMUST00000190277 783 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm29192-201ENSMUST00000190942 377 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm37449-201ENSMUST00000193016 270 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm18658-201ENSMUST00000195558 270 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC0.94□□□□□ -2.26
Col6a4A2AX52 Igkv11-114-201ENSMUST00000200013 346 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm45365-201ENSMUST00000209489 256 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Snord14a-201ENSMUST00000082807 87 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm23517-201ENSMUST00000082830 192 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Col6a4A2AX52 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm42968-201ENSMUST00000198578 1372 ntBASIC0.94□□□□□ -2.26
Col6a4A2AX52 Gm45262-201ENSMUST00000209917 1463 ntBASIC0.93□□□□□ -2.26
Col6a4A2AX52 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms