Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm26414-201ENSMUST00000157674 269 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm26173-201ENSMUST00000158416 136 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm9593-201ENSMUST00000166034 469 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm24925-201ENSMUST00000178157 107 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm21726-201ENSMUST00000179654 392 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm38238-201ENSMUST00000194334 346 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.85□□□□□ -2.11
Scn3aA2ASI5 Gm24430-201ENSMUST00000104077 104 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Gm13343-201ENSMUST00000116474 105 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Mir1192-201ENSMUST00000116976 121 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Gm14007-201ENSMUST00000118288 210 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Gm24241-201ENSMUST00000157787 145 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Gm25156-201ENSMUST00000179809 79 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Mir6950-201ENSMUST00000184438 73 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Gm23727-201ENSMUST00000083352 164 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Mir423-201ENSMUST00000083584 109 ntBASIC1.84□□□□□ -2.11
Scn3aA2ASI5 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Scn3aA2ASI5 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Scn3aA2ASI5 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Scn3aA2ASI5 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm12639-201ENSMUST00000121400 493 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm21758-201ENSMUST00000179336 819 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Mir6995-201ENSMUST00000183658 71 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Mir6382-201ENSMUST00000184055 110 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm29647-201ENSMUST00000188795 666 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm20832-201ENSMUST00000189076 665 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm28241-201ENSMUST00000190916 235 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm28504-201ENSMUST00000190977 666 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm31511-201ENSMUST00000193134 657 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm35843-201ENSMUST00000193716 666 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm30638-201ENSMUST00000195570 656 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm36728-201ENSMUST00000195782 665 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm19089-201ENSMUST00000197207 613 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm15896-201ENSMUST00000118045 440 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm24198-201ENSMUST00000157812 108 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm22098-201ENSMUST00000157930 85 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm24076-201ENSMUST00000158179 94 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Mir6402-201ENSMUST00000183406 80 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm44476-201ENSMUST00000196225 91 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Mir19a-201ENSMUST00000083482 82 ntBASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Scn3aA2ASI5 Gm13640-201ENSMUST00000118445 264 ntBASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Gm11813-201ENSMUST00000118586 291 ntBASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Gm2830-201ENSMUST00000140330 385 ntBASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Gm23137-201ENSMUST00000157559 107 ntBASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Mir6905-201ENSMUST00000184228 70 ntBASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.82□□□□□ -2.12
Scn3aA2ASI5 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Gm22810-201ENSMUST00000082741 158 ntBASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Scn3aA2ASI5 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Scn3aA2ASI5 Gm14073-201ENSMUST00000117344 381 ntBASIC1.81□□□□□ -2.12
Scn3aA2ASI5 Gm26181-201ENSMUST00000157687 106 ntBASIC1.81□□□□□ -2.12
Scn3aA2ASI5 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.81□□□□□ -2.12
Scn3aA2ASI5 Gm9071-201ENSMUST00000165915 474 ntBASIC1.81□□□□□ -2.12
Scn3aA2ASI5 Gm2930-201ENSMUST00000170403 474 ntBASIC1.81□□□□□ -2.12
Scn3aA2ASI5 Gm9892-201ENSMUST00000182415 992 ntBASIC1.81□□□□□ -2.12
Scn3aA2ASI5 Gm29184-201ENSMUST00000190038 334 ntBASIC1.81□□□□□ -2.12
Scn3aA2ASI5 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.81□□□□□ -2.12
Scn3aA2ASI5 Gm7871-201ENSMUST00000195346 618 ntBASIC1.81□□□□□ -2.12
Scn3aA2ASI5 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms