Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm17063-201ENSMUST00000168135 456 ntBASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Gm18397-201ENSMUST00000176704 587 ntBASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Gm42578-201ENSMUST00000199960 194 ntBASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 AC192088.2-201ENSMUST00000227590 411 ntBASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Gm22997-201ENSMUST00000082845 107 ntBASIC0.9□□□□□ -2.27
Trav3-4A0A075B654 Gm42639-201ENSMUST00000197061 1871 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Gm24127-201ENSMUST00000104110 130 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Gm15714-201ENSMUST00000117168 250 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Defa-ps8-201ENSMUST00000120972 279 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Gm24358-201ENSMUST00000158424 288 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Gm22257-201ENSMUST00000158687 301 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Gm22500-201ENSMUST00000158982 99 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Gm6395-201ENSMUST00000167639 691 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Gm18415-201ENSMUST00000177464 647 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Mir6907-201ENSMUST00000183764 71 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 AC117232.1-201ENSMUST00000197964 119 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 AC167202.1-201ENSMUST00000219027 331 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Gm23628-201ENSMUST00000082464 173 ntBASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC0.89□□□□□ -2.27
Trav3-4A0A075B654 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm13581-201ENSMUST00000120675 278 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm22338-201ENSMUST00000157715 129 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm26213-201ENSMUST00000158582 110 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm20477-201ENSMUST00000174028 280 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Mir3057-201ENSMUST00000175040 91 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm22129-201ENSMUST00000179034 107 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm27588-201ENSMUST00000185096 263 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm28838-201ENSMUST00000186338 315 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm29635-201ENSMUST00000187221 315 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm29026-201ENSMUST00000187787 315 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm28797-201ENSMUST00000188543 315 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm28855-201ENSMUST00000188680 315 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm28705-201ENSMUST00000189548 315 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm28939-201ENSMUST00000190351 315 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm28223-201ENSMUST00000190469 315 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm29092-201ENSMUST00000190768 315 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm37377-201ENSMUST00000191733 304 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 CT033785.1-201ENSMUST00000224872 272 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Gm22265-201ENSMUST00000082947 116 ntBASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Trav3-4A0A075B654 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm24582-201ENSMUST00000103967 103 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm11065-201ENSMUST00000111462 228 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm15120-201ENSMUST00000120602 301 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm24915-201ENSMUST00000157288 78 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm23752-201ENSMUST00000157584 115 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm23865-201ENSMUST00000157723 97 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm27517-201ENSMUST00000184347 236 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm6445-201ENSMUST00000189515 1112 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm37989-201ENSMUST00000195202 803 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm44393-201ENSMUST00000197418 138 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm44654-201ENSMUST00000208052 329 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 AC164597.2-201ENSMUST00000226738 603 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 AC115735.3-201ENSMUST00000227757 513 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Gm22683-201ENSMUST00000082854 137 ntBASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Trav3-4A0A075B654 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm14915-201ENSMUST00000120747 204 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm22098-201ENSMUST00000157930 85 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm22192-201ENSMUST00000175128 85 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm21744-201ENSMUST00000178403 662 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm21758-201ENSMUST00000179336 819 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm16399-201ENSMUST00000181423 219 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm29413-201ENSMUST00000186019 880 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm29492-201ENSMUST00000187124 457 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm28700-201ENSMUST00000187614 579 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm29639-201ENSMUST00000188375 580 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm29647-201ENSMUST00000188795 666 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm20832-201ENSMUST00000189076 665 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm28843-201ENSMUST00000189198 678 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm28241-201ENSMUST00000190916 235 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm28504-201ENSMUST00000190977 666 ntBASIC0.86□□□□□ -2.27
Trav3-4A0A075B654 Gm29546-201ENSMUST00000191171 678 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 151.5 ms