Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
H2afb1S4R1E0 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm23242-201ENSMUST00000083055 107 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm23249-201ENSMUST00000083369 161 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Olfr575-201ENSMUST00000084812 957 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm10343-201ENSMUST00000096279 348 ntBASIC2.55□□□□□ -2
H2afb1S4R1E0 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
H2afb1S4R1E0 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
H2afb1S4R1E0 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
H2afb1S4R1E0 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm22936-201ENSMUST00000103955 126 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm22939-201ENSMUST00000103958 131 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm26341-201ENSMUST00000104561 134 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm14670-201ENSMUST00000117327 337 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm14823-201ENSMUST00000117698 238 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm12876-201ENSMUST00000120975 408 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm22330-201ENSMUST00000158068 115 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm24264-201ENSMUST00000179835 94 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Mir6335-201ENSMUST00000184081 98 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm19257-201ENSMUST00000186121 183 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm6060-201ENSMUST00000188671 251 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm43955-201ENSMUST00000204332 142 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.54□□□□□ -2
H2afb1S4R1E0 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm25475-201ENSMUST00000082825 180 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm24948-201ENSMUST00000082866 207 ntBASIC2.54□□□□□ -2
H2afb1S4R1E0 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Mir499-201ENSMUST00000102357 79 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Mir669l-201ENSMUST00000103771 98 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm12042-201ENSMUST00000120479 301 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm12872-201ENSMUST00000121835 320 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm14389-201ENSMUST00000140453 241 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm26275-201ENSMUST00000157101 268 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm23411-201ENSMUST00000157988 62 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm24553-201ENSMUST00000158653 131 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm20794-201ENSMUST00000177626 628 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm18356-201ENSMUST00000185677 623 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.53□□□□□ -2
H2afb1S4R1E0 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm44149-201ENSMUST00000204256 226 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm17990-201ENSMUST00000211728 553 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm7948-201ENSMUST00000212607 844 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm10264-201ENSMUST00000220589 429 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.53□□□□□ -2
H2afb1S4R1E0 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm25856-201ENSMUST00000082786 75 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Snord104-201ENSMUST00000083192 70 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm25579-201ENSMUST00000083407 106 ntBASIC2.53□□□□□ -2
H2afb1S4R1E0 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm26396-201ENSMUST00000104093 132 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm22496-201ENSMUST00000104493 88 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm26088-201ENSMUST00000157896 131 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm25476-201ENSMUST00000175125 185 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm24810-201ENSMUST00000175317 70 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm25175-201ENSMUST00000178712 79 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm27582-201ENSMUST00000184084 126 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm28755-201ENSMUST00000185773 199 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm37007-201ENSMUST00000194234 319 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm33354-201ENSMUST00000195448 906 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.52□□□□□ -2.01
H2afb1S4R1E0 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
H2afb1S4R1E0 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm23627-201ENSMUST00000082459 107 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm22502-201ENSMUST00000082488 107 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm22977-201ENSMUST00000082615 107 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm24149-201ENSMUST00000082757 107 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm22577-201ENSMUST00000083731 109 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm3867-201ENSMUST00000086108 279 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Olfr895-201ENSMUST00000093864 951 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.52□□□□□ -2.01
H2afb1S4R1E0 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm11285-201ENSMUST00000118443 322 ntBASIC2.51□□□□□ -2.01
H2afb1S4R1E0 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms