Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm43944-201ENSMUST00000205220 120 ntBASIC0.98□□□□□ -2.25
Scn11aQ9R053 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.98□□□□□ -2.25
Scn11aQ9R053 AC158803.1-201ENSMUST00000219495 316 ntBASIC0.98□□□□□ -2.25
Scn11aQ9R053 Snora3-201ENSMUST00000083082 132 ntBASIC0.98□□□□□ -2.25
Scn11aQ9R053 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Scn11aQ9R053 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Scn11aQ9R053 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Scn11aQ9R053 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
Scn11aQ9R053 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.97□□□□□ -2.25
Scn11aQ9R053 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC0.97□□□□□ -2.25
Scn11aQ9R053 Gm25107-201ENSMUST00000122472 129 ntBASIC0.97□□□□□ -2.25
Scn11aQ9R053 Gm22559-201ENSMUST00000157329 134 ntBASIC0.97□□□□□ -2.25
Scn11aQ9R053 Gm25996-201ENSMUST00000175393 117 ntBASIC0.97□□□□□ -2.25
Scn11aQ9R053 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.97□□□□□ -2.25
Scn11aQ9R053 Gm18414-201ENSMUST00000210858 694 ntBASIC0.97□□□□□ -2.25
Scn11aQ9R053 AC163289.1-201ENSMUST00000215919 262 ntBASIC0.97□□□□□ -2.25
Scn11aQ9R053 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC0.97□□□□□ -2.25
Scn11aQ9R053 Gm23735-201ENSMUST00000082551 134 ntBASIC0.97□□□□□ -2.25
Scn11aQ9R053 Gm44286-201ENSMUST00000204098 1487 ntBASIC0.97□□□□□ -2.25
Scn11aQ9R053 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC0.96□□□□□ -2.26
Scn11aQ9R053 Mir3109-201ENSMUST00000175301 88 ntBASIC0.96□□□□□ -2.26
Scn11aQ9R053 Mir6402-201ENSMUST00000183406 80 ntBASIC0.96□□□□□ -2.26
Scn11aQ9R053 AC159293.2-201ENSMUST00000222289 424 ntBASIC0.96□□□□□ -2.26
Scn11aQ9R053 AC124524.1-201ENSMUST00000225833 181 ntBASIC0.96□□□□□ -2.26
Scn11aQ9R053 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Scn11aQ9R053 Gm14651-201ENSMUST00000147192 442 ntBASIC0.96□□□□□ -2.26
Scn11aQ9R053 Gm23588-201ENSMUST00000157659 99 ntBASIC0.96□□□□□ -2.26
Scn11aQ9R053 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC0.96□□□□□ -2.26
Scn11aQ9R053 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC0.96□□□□□ -2.26
Scn11aQ9R053 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC0.96□□□□□ -2.26
Scn11aQ9R053 Gm25856-201ENSMUST00000082786 75 ntBASIC0.96□□□□□ -2.26
Scn11aQ9R053 Gm24805-201ENSMUST00000082931 104 ntBASIC0.96□□□□□ -2.26
Scn11aQ9R053 Gm17085-201ENSMUST00000165425 502 ntBASIC0.95□□□□□ -2.26
Scn11aQ9R053 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.95□□□□□ -2.26
Scn11aQ9R053 Gm29641-201ENSMUST00000188955 259 ntBASIC0.95□□□□□ -2.26
Scn11aQ9R053 Gm28779-201ENSMUST00000189678 323 ntBASIC0.95□□□□□ -2.26
Scn11aQ9R053 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Scn11aQ9R053 Gm25099-201ENSMUST00000093716 116 ntBASIC0.95□□□□□ -2.26
Scn11aQ9R053 Gm24793-201ENSMUST00000104289 132 ntBASIC0.94□□□□□ -2.26
Scn11aQ9R053 Gm22425-201ENSMUST00000158532 138 ntBASIC0.94□□□□□ -2.26
Scn11aQ9R053 Gm42438-201ENSMUST00000197832 974 ntBASIC0.94□□□□□ -2.26
Scn11aQ9R053 n-R5s79-201ENSMUST00000083071 120 ntBASIC0.94□□□□□ -2.26
Scn11aQ9R053 Gm24258-201ENSMUST00000083739 133 ntBASIC0.94□□□□□ -2.26
Scn11aQ9R053 Gm24431-201ENSMUST00000104073 66 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm14039-201ENSMUST00000118705 101 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm11797-201ENSMUST00000121336 754 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm6182-201ENSMUST00000156439 1208 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm25491-201ENSMUST00000158733 308 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Scn11aQ9R053 Mir6904-201ENSMUST00000183443 67 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm18775-201ENSMUST00000190763 586 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm42635-201ENSMUST00000200266 2571 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm12417-201ENSMUST00000119153 403 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Mup-ps21-201ENSMUST00000119998 448 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm43894-201ENSMUST00000203274 688 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm44182-201ENSMUST00000204052 115 ntBASIC0.93□□□□□ -2.26
Scn11aQ9R053 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Scn11aQ9R053 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
Scn11aQ9R053 Gm24049-201ENSMUST00000102409 100 ntBASIC0.92□□□□□ -2.26
Scn11aQ9R053 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Scn11aQ9R053 Gm27722-201ENSMUST00000183908 76 ntBASIC0.92□□□□□ -2.26
Scn11aQ9R053 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.92□□□□□ -2.26
Scn11aQ9R053 Gm37213-201ENSMUST00000193077 586 ntBASIC0.92□□□□□ -2.26
Scn11aQ9R053 Gm45313-201ENSMUST00000210584 178 ntBASIC0.92□□□□□ -2.26
Scn11aQ9R053 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Scn11aQ9R053 Gm45262-201ENSMUST00000209917 1463 ntBASIC0.91□□□□□ -2.26
Scn11aQ9R053 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Scn11aQ9R053 Gm5287-201ENSMUST00000120666 598 ntBASIC0.91□□□□□ -2.26
Scn11aQ9R053 Gm22482-201ENSMUST00000122563 359 ntBASIC0.91□□□□□ -2.26
Scn11aQ9R053 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.91□□□□□ -2.26
Scn11aQ9R053 Gm22663-201ENSMUST00000158721 102 ntBASIC0.91□□□□□ -2.26
Scn11aQ9R053 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC0.91□□□□□ -2.26
Scn11aQ9R053 Gm29920-201ENSMUST00000206876 754 ntBASIC0.91□□□□□ -2.26
Scn11aQ9R053 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Scn11aQ9R053 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
Scn11aQ9R053 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Scn11aQ9R053 Gm25838-201ENSMUST00000158920 120 ntBASIC0.91□□□□□ -2.26
Scn11aQ9R053 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.91□□□□□ -2.26
Scn11aQ9R053 Gm21147-201ENSMUST00000186046 913 ntBASIC0.91□□□□□ -2.26
Scn11aQ9R053 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.91□□□□□ -2.26
Scn11aQ9R053 CT485608.2-201ENSMUST00000227210 291 ntBASIC0.91□□□□□ -2.26
Scn11aQ9R053 Olfr197-201ENSMUST00000080031 926 ntBASIC0.91□□□□□ -2.26
Scn11aQ9R053 Nron-204ENSMUST00000158971 370 ntBASIC0.9□□□□□ -2.27
Scn11aQ9R053 Mir7091-201ENSMUST00000184075 79 ntBASIC0.9□□□□□ -2.27
Scn11aQ9R053 Gm6590-201ENSMUST00000203343 687 ntBASIC0.9□□□□□ -2.27
Scn11aQ9R053 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.9□□□□□ -2.27
Scn11aQ9R053 Gm24208-201ENSMUST00000082783 135 ntBASIC0.9□□□□□ -2.27
Scn11aQ9R053 Snord118-201ENSMUST00000082965 135 ntBASIC0.9□□□□□ -2.27
Scn11aQ9R053 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Scn11aQ9R053 Gm8217-201ENSMUST00000119136 465 ntBASIC0.89□□□□□ -2.27
Scn11aQ9R053 Gm14980-201ENSMUST00000121247 736 ntBASIC0.89□□□□□ -2.27
Scn11aQ9R053 Gm22163-201ENSMUST00000158408 135 ntBASIC0.89□□□□□ -2.27
Scn11aQ9R053 Gm22418-201ENSMUST00000180326 107 ntBASIC0.89□□□□□ -2.27
Scn11aQ9R053 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.88□□□□□ -2.27
Scn11aQ9R053 Gm22646-201ENSMUST00000175130 115 ntBASIC0.88□□□□□ -2.27
Scn11aQ9R053 Gm27028-201ENSMUST00000182303 399 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 160.2 ms