Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Mir222-201ENSMUST00000083537 79 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Mir29c-201ENSMUST00000083614 88 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trem1Q9JKE2 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm15714-201ENSMUST00000117168 250 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm11849-201ENSMUST00000121293 261 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm5900-201ENSMUST00000179862 375 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm43405-201ENSMUST00000198642 337 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm44212-201ENSMUST00000205016 897 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm45590-201ENSMUST00000209715 262 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm2436-201ENSMUST00000219562 774 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 n-R5s176-201ENSMUST00000082683 109 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm24151-201ENSMUST00000082758 141 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Mir107-201ENSMUST00000083660 87 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Snora33-201ENSMUST00000093556 129 ntBASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trem1Q9JKE2 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Mir466k-201ENSMUST00000116774 122 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm14558-201ENSMUST00000117458 381 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm11786-201ENSMUST00000120799 155 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm13356-201ENSMUST00000121678 335 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm25706-201ENSMUST00000157828 247 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm24837-201ENSMUST00000158683 81 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm28058-201ENSMUST00000186421 264 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm21673-201ENSMUST00000186640 436 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm28113-201ENSMUST00000188280 229 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm21135-201ENSMUST00000189023 436 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm28299-201ENSMUST00000189908 339 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Snord43-201ENSMUST00000199549 108 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC1.96□□□□□ -2.1
Trem1Q9JKE2 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 AC166830.1-201ENSMUST00000224201 533 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Gm26446-201ENSMUST00000082455 103 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.96□□□□□ -2.1
Trem1Q9JKE2 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm14774-201ENSMUST00000117857 536 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm12793-201ENSMUST00000119268 292 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm14709-201ENSMUST00000121225 304 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm14530-201ENSMUST00000122391 333 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm24857-201ENSMUST00000158061 310 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm2966-201ENSMUST00000166052 481 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm25451-201ENSMUST00000177832 121 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm27028-201ENSMUST00000182303 399 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm37757-201ENSMUST00000193072 210 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Mir3068-202ENSMUST00000197755 79 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm43114-201ENSMUST00000198298 343 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm43232-201ENSMUST00000201346 364 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm10297-201ENSMUST00000207136 651 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm44938-201ENSMUST00000208614 427 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm45730-201ENSMUST00000212560 395 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm30534-201ENSMUST00000217928 207 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.95□□□□□ -2.1
Trem1Q9JKE2 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Gm25582-201ENSMUST00000083412 110 ntBASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.95□□□□□ -2.1
Trem1Q9JKE2 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
Trem1Q9JKE2 CT009504.1-201ENSMUST00000218252 3330 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm14215-201ENSMUST00000120578 221 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm14564-201ENSMUST00000122159 294 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm23206-201ENSMUST00000122720 184 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm24138-201ENSMUST00000157572 114 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm23381-201ENSMUST00000157676 94 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm2930-201ENSMUST00000170403 474 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm27722-201ENSMUST00000183908 76 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm27249-201ENSMUST00000185049 328 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm27588-201ENSMUST00000185096 263 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.94□□□□□ -2.1
Trem1Q9JKE2 Gm18703-201ENSMUST00000215318 333 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.94□□□□□ -2.1
Trem1Q9JKE2 AC134335.1-201ENSMUST00000227626 329 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms