Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm14360-201ENSMUST00000120670 393 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm12105-201ENSMUST00000120846 779 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm14600-201ENSMUST00000121032 630 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm22452-201ENSMUST00000122804 104 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm22098-201ENSMUST00000157930 85 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm22527-201ENSMUST00000158816 106 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm24100-201ENSMUST00000178592 79 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Mir7679-201ENSMUST00000183379 63 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm28825-201ENSMUST00000186233 238 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm19891-201ENSMUST00000189771 303 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm7837-201ENSMUST00000190873 412 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm37771-201ENSMUST00000193121 265 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm44384-201ENSMUST00000200208 114 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm18453-201ENSMUST00000208000 626 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
Trem3Q9JKE1 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm2446-201ENSMUST00000220144 772 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm10298-201ENSMUST00000074801 265 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm25755-201ENSMUST00000083396 107 ntBASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Trem3Q9JKE1 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trem3Q9JKE1 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm25168-201ENSMUST00000104189 132 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm25376-201ENSMUST00000104340 133 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm6923-201ENSMUST00000118343 406 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm13432-201ENSMUST00000118861 241 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm22793-201ENSMUST00000157227 330 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm24358-201ENSMUST00000158424 288 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm25711-201ENSMUST00000158633 128 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm24837-201ENSMUST00000158683 81 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm17062-201ENSMUST00000166987 461 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm28000-201ENSMUST00000184380 85 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.24□□□□□ -2.21
Trem3Q9JKE1 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm29809-201ENSMUST00000218423 493 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Gm26327-201ENSMUST00000093724 111 ntBASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Trem3Q9JKE1 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm25992-201ENSMUST00000102437 109 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm23109-201ENSMUST00000116867 126 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm13728-201ENSMUST00000117471 400 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm13355-201ENSMUST00000117996 317 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm12656-201ENSMUST00000118149 577 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm11784-201ENSMUST00000118568 474 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm6444-201ENSMUST00000119611 458 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm13482-201ENSMUST00000119842 254 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm15115-201ENSMUST00000121145 264 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm24780-201ENSMUST00000157635 143 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm24846-201ENSMUST00000158033 108 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm22611-201ENSMUST00000158288 150 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm22264-201ENSMUST00000178200 107 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Mir6997-201ENSMUST00000184313 71 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm37568-201ENSMUST00000191755 364 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Mir378a-201ENSMUST00000198300 66 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm22061-201ENSMUST00000082557 107 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Gm24805-201ENSMUST00000082931 104 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Snord7-201ENSMUST00000083781 97 ntBASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
Trem3Q9JKE1 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Mdga2-203ENSMUST00000113942 423 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm15183-201ENSMUST00000118933 348 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm14913-201ENSMUST00000120011 1093 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm12881-201ENSMUST00000121191 203 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm11471-201ENSMUST00000121824 198 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm13194-201ENSMUST00000142299 311 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm22963-201ENSMUST00000157960 91 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm26024-201ENSMUST00000158657 322 ntBASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.22□□□□□ -2.21
Trem3Q9JKE1 Gm16162-201ENSMUST00000162296 297 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms