Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.48□□□□□ -2.33
Smco4Q9JIS3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Smco4Q9JIS3 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm25560-201ENSMUST00000104606 176 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm14943-201ENSMUST00000118056 546 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm14411-201ENSMUST00000121798 914 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm25391-201ENSMUST00000157342 134 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm25332-201ENSMUST00000158038 105 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm23704-201ENSMUST00000158844 340 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm16404-201ENSMUST00000177739 468 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm7958-201ENSMUST00000178255 468 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm7950-201ENSMUST00000179633 468 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm14598-201ENSMUST00000180109 468 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm14625-201ENSMUST00000180231 468 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 CT572985.2-201ENSMUST00000220496 211 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm22302-201ENSMUST00000082657 106 ntBASIC0.47□□□□□ -2.33
Smco4Q9JIS3 Gm24579-201ENSMUST00000103964 144 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm14795-201ENSMUST00000118461 471 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm14915-201ENSMUST00000120747 204 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Defa-ps6-201ENSMUST00000122172 282 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm24229-201ENSMUST00000158830 118 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm18397-201ENSMUST00000176704 587 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm37219-201ENSMUST00000192036 926 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm34139-201ENSMUST00000196166 294 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm42533-201ENSMUST00000196247 157 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm44320-201ENSMUST00000199276 86 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm7984-201ENSMUST00000060640 538 ntBASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Smco4Q9JIS3 Gm24385-201ENSMUST00000122694 350 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm23752-201ENSMUST00000157584 115 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm24747-201ENSMUST00000157835 87 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm25711-201ENSMUST00000158633 128 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm16038-201ENSMUST00000159317 193 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm20058-201ENSMUST00000186939 284 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm43739-201ENSMUST00000198294 307 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm44408-201ENSMUST00000200205 66 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm44459-201ENSMUST00000203926 160 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm44254-201ENSMUST00000204184 322 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm45382-201ENSMUST00000210607 151 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm8940-201ENSMUST00000212585 219 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 AC160970.1-201ENSMUST00000219311 475 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm10264-201ENSMUST00000220589 429 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 AC134860.6-201ENSMUST00000226038 285 ntBASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Smco4Q9JIS3 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Smco4Q9JIS3 Gm13239-201ENSMUST00000119920 637 ntBASIC0.44□□□□□ -2.34
Smco4Q9JIS3 Gm14623-201ENSMUST00000121398 603 ntBASIC0.44□□□□□ -2.34
Smco4Q9JIS3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC0.44□□□□□ -2.34
Smco4Q9JIS3 Gm37081-201ENSMUST00000192034 196 ntBASIC0.44□□□□□ -2.34
Smco4Q9JIS3 Gm43979-201ENSMUST00000203179 475 ntBASIC0.44□□□□□ -2.34
Smco4Q9JIS3 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.44□□□□□ -2.34
Smco4Q9JIS3 Gm25168-201ENSMUST00000104189 132 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm7974-201ENSMUST00000117154 408 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm12512-201ENSMUST00000119620 217 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm13356-201ENSMUST00000121678 335 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm24333-201ENSMUST00000175101 84 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm7329-201ENSMUST00000185915 210 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm43250-201ENSMUST00000196536 273 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm44607-201ENSMUST00000205611 1090 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gm44654-201ENSMUST00000208052 329 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 CT030238.4-201ENSMUST00000228579 801 ntBASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Smco4Q9JIS3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Gm23897-201ENSMUST00000158110 158 ntBASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Gm22515-201ENSMUST00000158273 305 ntBASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Gm3025-201ENSMUST00000163454 489 ntBASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Gm3111-201ENSMUST00000167426 490 ntBASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Gm27517-201ENSMUST00000184347 236 ntBASIC0.42□□□□□ -2.34
Smco4Q9JIS3 Gm29429-201ENSMUST00000187071 121 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 124.1 ms