Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim54Q9ERP3 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim54Q9ERP3 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm12723-201ENSMUST00000120700 451 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm14578-201ENSMUST00000122166 391 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm23752-201ENSMUST00000157584 115 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm25909-201ENSMUST00000157619 121 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm24853-201ENSMUST00000158026 121 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm22891-201ENSMUST00000158641 164 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm24862-201ENSMUST00000179103 79 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm23310-201ENSMUST00000179105 79 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm23191-201ENSMUST00000179147 107 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm25461-201ENSMUST00000179293 79 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm44399-201ENSMUST00000205043 226 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm44825-201ENSMUST00000207557 150 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm44598-201ENSMUST00000207566 150 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm17990-201ENSMUST00000211728 553 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm18015-201ENSMUST00000214879 316 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm22247-201ENSMUST00000082476 131 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm25579-201ENSMUST00000083407 106 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm22365-201ENSMUST00000093750 117 ntBASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim54Q9ERP3 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Gm42606-201ENSMUST00000114209 239 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Gm14897-201ENSMUST00000118213 207 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Gm24409-201ENSMUST00000157881 152 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Gm24958-201ENSMUST00000158009 97 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Gm22257-201ENSMUST00000158687 301 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Mir3965-201ENSMUST00000175570 69 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Gm45312-201ENSMUST00000210566 311 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Mir208a-201ENSMUST00000083498 83 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Mir10a-201ENSMUST00000083585 110 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Gm23042-201ENSMUST00000083866 101 ntBASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trim54Q9ERP3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim54Q9ERP3 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm14624-201ENSMUST00000117746 192 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm14020-201ENSMUST00000118165 662 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm14287-201ENSMUST00000121060 117 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm23956-201ENSMUST00000157211 119 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm24724-201ENSMUST00000158230 107 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm37399-201ENSMUST00000195224 416 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm43723-201ENSMUST00000196886 189 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm18971-201ENSMUST00000197240 374 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm32222-201ENSMUST00000203296 298 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm44223-201ENSMUST00000204854 114 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm7422-201ENSMUST00000220115 640 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm24765-201ENSMUST00000083691 103 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.25□□□□□ -1.89
Trim54Q9ERP3 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Gm24890-201ENSMUST00000104389 102 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Gm23183-201ENSMUST00000122595 323 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Gm23169-201ENSMUST00000157157 112 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Gm26214-201ENSMUST00000158581 107 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Gm27869-201ENSMUST00000184327 122 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Gm7871-201ENSMUST00000195346 618 ntBASIC3.24□□□□□ -1.89
Trim54Q9ERP3 Gm43529-201ENSMUST00000199178 412 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms