Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm14651-201ENSMUST00000147192 442 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm25961-201ENSMUST00000157174 135 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Gm28779-201ENSMUST00000189678 323 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 AC157772.2-201ENSMUST00000228202 259 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 CT030662.3-201ENSMUST00000228751 476 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.06□□□□□ -2.24
Cpsf1Q9EPU4 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.05□□□□□ -2.24
Cpsf1Q9EPU4 Gm23321-201ENSMUST00000104465 126 ntBASIC1.05□□□□□ -2.24
Cpsf1Q9EPU4 Gm22340-201ENSMUST00000157717 114 ntBASIC1.05□□□□□ -2.24
Cpsf1Q9EPU4 Gm27999-201ENSMUST00000183539 193 ntBASIC1.05□□□□□ -2.24
Cpsf1Q9EPU4 Gm28862-201ENSMUST00000188246 163 ntBASIC1.05□□□□□ -2.24
Cpsf1Q9EPU4 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.05□□□□□ -2.24
Cpsf1Q9EPU4 Gm6590-201ENSMUST00000203343 687 ntBASIC1.05□□□□□ -2.24
Cpsf1Q9EPU4 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Cpsf1Q9EPU4 Gm25755-201ENSMUST00000083396 107 ntBASIC1.05□□□□□ -2.24
Cpsf1Q9EPU4 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Cpsf1Q9EPU4 Gm14674-201ENSMUST00000117816 342 ntBASIC1.04□□□□□ -2.24
Cpsf1Q9EPU4 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.04□□□□□ -2.24
Cpsf1Q9EPU4 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Cpsf1Q9EPU4 Gm45590-201ENSMUST00000209715 262 ntBASIC1.04□□□□□ -2.24
Cpsf1Q9EPU4 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Cpsf1Q9EPU4 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Gm26278-201ENSMUST00000157098 132 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Gm22431-201ENSMUST00000158545 107 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Gm43043-201ENSMUST00000196579 412 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Gm44384-201ENSMUST00000200208 114 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Gm44472-201ENSMUST00000204922 943 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Gm19233-201ENSMUST00000219772 936 ntBASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Cpsf1Q9EPU4 Gm16265-201ENSMUST00000134558 108 ntBASIC1.02□□□□□ -2.25
Cpsf1Q9EPU4 Gm22082-201ENSMUST00000157587 161 ntBASIC1.02□□□□□ -2.25
Cpsf1Q9EPU4 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.02□□□□□ -2.25
Cpsf1Q9EPU4 Gm46194-201ENSMUST00000218136 320 ntBASIC1.02□□□□□ -2.25
Cpsf1Q9EPU4 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.02□□□□□ -2.25
Cpsf1Q9EPU4 Gm44562-201ENSMUST00000207194 1347 ntBASIC1.02□□□□□ -2.25
Cpsf1Q9EPU4 Gm23907-201ENSMUST00000104595 189 ntBASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 Gm14868-201ENSMUST00000117840 216 ntBASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 Gm11784-201ENSMUST00000118568 474 ntBASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 Gm22208-201ENSMUST00000122658 110 ntBASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 Gm36997-201ENSMUST00000195090 707 ntBASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 Gm44403-201ENSMUST00000198554 129 ntBASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 Gm44910-201ENSMUST00000208451 396 ntBASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 AC115878.1-201ENSMUST00000227247 334 ntBASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Cpsf1Q9EPU4 Gm14694-201ENSMUST00000121856 282 ntBASIC1□□□□□ -2.25
Cpsf1Q9EPU4 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Gm22583-201ENSMUST00000178031 107 ntBASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Gm27869-201ENSMUST00000184327 122 ntBASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Gm29184-201ENSMUST00000190038 334 ntBASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Gm38060-201ENSMUST00000194822 464 ntBASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Gm43199-201ENSMUST00000200019 307 ntBASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Gm44727-201ENSMUST00000204225 451 ntBASIC1□□□□□ -2.25
Cpsf1Q9EPU4 AC158803.1-201ENSMUST00000219495 316 ntBASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Gm44286-201ENSMUST00000204098 1487 ntBASIC1□□□□□ -2.25
Cpsf1Q9EPU4 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 Gm11857-201ENSMUST00000119817 324 ntBASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 Nron-204ENSMUST00000158971 370 ntBASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 Gm20630-201ENSMUST00000177387 551 ntBASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 Mir6383-201ENSMUST00000184545 116 ntBASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 Gm18406-201ENSMUST00000185872 669 ntBASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 AC164567.2-201ENSMUST00000219363 445 ntBASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 Gm23723-201ENSMUST00000082996 132 ntBASIC0.99□□□□□ -2.25
Cpsf1Q9EPU4 Gm14049-201ENSMUST00000121009 636 ntBASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Gm25633-201ENSMUST00000178565 107 ntBASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Gm17990-201ENSMUST00000211728 553 ntBASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Gm29641-201ENSMUST00000188955 259 ntBASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 AC120540.2-201ENSMUST00000221716 387 ntBASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Gm24805-201ENSMUST00000082931 104 ntBASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Mir300-201ENSMUST00000083485 79 ntBASIC0.98□□□□□ -2.25
Cpsf1Q9EPU4 Gm24715-201ENSMUST00000102377 95 ntBASIC0.97□□□□□ -2.25
Cpsf1Q9EPU4 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Cpsf1Q9EPU4 Gm22560-201ENSMUST00000157332 120 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 111.1 ms