Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm45678-201ENSMUST00000210509 295 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Gm7422-201ENSMUST00000220115 640 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC4.35□□□□□ -1.71
Upf1Q9EPU0 AC154576.2-202ENSMUST00000223916 688 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Gm25410-201ENSMUST00000083758 137 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Upf1Q9EPU0 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm6058-201ENSMUST00000154261 399 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm24885-201ENSMUST00000158783 270 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm25369-201ENSMUST00000158848 132 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm25643-201ENSMUST00000158874 103 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Mir6355-201ENSMUST00000183687 106 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm37162-201ENSMUST00000191708 551 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm28724-202ENSMUST00000194218 295 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm43402-201ENSMUST00000197159 159 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm18982-201ENSMUST00000198118 529 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 AC158606.1-201ENSMUST00000220078 325 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Snora23-201ENSMUST00000082517 184 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm22806-201ENSMUST00000082738 136 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm23042-201ENSMUST00000083866 101 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Gm22353-201ENSMUST00000083918 136 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Mir504-201ENSMUST00000093602 79 ntBASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf1Q9EPU0 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Upf1Q9EPU0 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Upf1Q9EPU0 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Upf1Q9EPU0 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm43300-201ENSMUST00000198540 2043 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm12956-201ENSMUST00000122184 414 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm24005-201ENSMUST00000158459 296 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm23921-201ENSMUST00000175258 107 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm27402-201ENSMUST00000183890 120 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm27997-201ENSMUST00000184942 69 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm29484-201ENSMUST00000186067 324 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm29147-201ENSMUST00000186846 315 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm29064-201ENSMUST00000187014 813 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm29227-201ENSMUST00000187139 315 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm29034-201ENSMUST00000188099 315 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm28160-201ENSMUST00000191229 315 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm37129-201ENSMUST00000195791 315 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm18384-201ENSMUST00000195974 808 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 AC154271.1-201ENSMUST00000224780 383 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm26457-201ENSMUST00000082678 78 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Gm24948-201ENSMUST00000082866 207 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Upf1Q9EPU0 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Upf1Q9EPU0 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upf1Q9EPU0 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm25565-201ENSMUST00000104605 105 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm14774-201ENSMUST00000117857 536 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm8840-201ENSMUST00000122454 386 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm24244-201ENSMUST00000157317 130 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm24666-201ENSMUST00000158937 167 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm6374-201ENSMUST00000159051 788 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm17186-201ENSMUST00000171742 456 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm20399-201ENSMUST00000174652 132 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm27521-201ENSMUST00000184022 64 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm37085-201ENSMUST00000193780 196 ntBASIC4.32□□□□□ -1.72
Upf1Q9EPU0 Gm35931-201ENSMUST00000203931 448 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms