Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Snora41-201ENSMUST00000082668 132 ntBASIC0.5□□□□□ -2.33
Hmgn3Q9DCB1 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.5□□□□□ -2.33
Hmgn3Q9DCB1 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm12646-201ENSMUST00000119144 238 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm6956-201ENSMUST00000134724 546 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm22515-201ENSMUST00000158273 305 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm24885-201ENSMUST00000158783 270 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm23355-201ENSMUST00000177614 107 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm37684-201ENSMUST00000192779 355 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 AC142113.2-201ENSMUST00000217425 748 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm23721-201ENSMUST00000083005 107 ntBASIC0.49□□□□□ -2.33
Hmgn3Q9DCB1 Gm23015-201ENSMUST00000104145 128 ntBASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Gm24889-201ENSMUST00000104388 132 ntBASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Gm18354-201ENSMUST00000173515 1068 ntBASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Gm44254-201ENSMUST00000204184 322 ntBASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 AC123803.1-201ENSMUST00000216093 189 ntBASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Gm4921-201ENSMUST00000219804 992 ntBASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 Gm23100-201ENSMUST00000083455 141 ntBASIC0.48□□□□□ -2.33
Hmgn3Q9DCB1 CT009510.2-203ENSMUST00000226704 2136 ntBASIC0.47□□□□□ -2.33
Hmgn3Q9DCB1 Gm25624-201ENSMUST00000157222 275 ntBASIC0.47□□□□□ -2.33
Hmgn3Q9DCB1 Gm22535-201ENSMUST00000158174 119 ntBASIC0.47□□□□□ -2.33
Hmgn3Q9DCB1 Snord87-201ENSMUST00000175437 87 ntBASIC0.47□□□□□ -2.33
Hmgn3Q9DCB1 Gm26236-201ENSMUST00000175536 137 ntBASIC0.47□□□□□ -2.33
Hmgn3Q9DCB1 Mir6399-201ENSMUST00000184050 84 ntBASIC0.47□□□□□ -2.33
Hmgn3Q9DCB1 Gm37005-201ENSMUST00000193281 1164 ntBASIC0.47□□□□□ -2.33
Hmgn3Q9DCB1 Gm38060-201ENSMUST00000194822 464 ntBASIC0.47□□□□□ -2.33
Hmgn3Q9DCB1 Gm45375-201ENSMUST00000210338 280 ntBASIC0.47□□□□□ -2.33
Hmgn3Q9DCB1 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC0.47□□□□□ -2.33
Hmgn3Q9DCB1 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm14558-201ENSMUST00000117458 381 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm10074-201ENSMUST00000174543 249 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm7258-201ENSMUST00000179317 300 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm8151-201ENSMUST00000184817 871 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm29573-201ENSMUST00000190291 919 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm44465-201ENSMUST00000199536 114 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm42960-201ENSMUST00000202160 241 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm45173-201ENSMUST00000206819 305 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm44830-201ENSMUST00000207667 584 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 AC160970.1-201ENSMUST00000219311 475 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 AC140210.1-201ENSMUST00000224961 534 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Gm24144-201ENSMUST00000082632 111 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Mir137-201ENSMUST00000083635 73 ntBASIC0.46□□□□□ -2.34
Hmgn3Q9DCB1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 Gm25068-201ENSMUST00000103895 110 ntBASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 Gm24915-201ENSMUST00000157288 78 ntBASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 Gm23559-201ENSMUST00000157824 103 ntBASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 Gm29397-201ENSMUST00000185205 333 ntBASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 Gm37219-201ENSMUST00000192036 926 ntBASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 AC105958.2-201ENSMUST00000214167 191 ntBASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 AC153646.1-201ENSMUST00000223229 1279 ntBASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 AC134254.5-201ENSMUST00000223436 400 ntBASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 Snord35a-201ENSMUST00000083884 90 ntBASIC0.45□□□□□ -2.34
Hmgn3Q9DCB1 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Gm15714-201ENSMUST00000117168 250 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Gm15037-201ENSMUST00000120358 259 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Gm14840-201ENSMUST00000122135 594 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Gm8988-201ENSMUST00000155015 1240 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Gm25333-201ENSMUST00000158035 246 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Snora24-201ENSMUST00000174989 130 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Gm26915-201ENSMUST00000183080 748 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Mir6540-201ENSMUST00000184886 108 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Gm7443-201ENSMUST00000206355 378 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Gm45316-201ENSMUST00000210128 162 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Gm6215-201ENSMUST00000119297 1386 ntBASIC0.44□□□□□ -2.34
Hmgn3Q9DCB1 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Hmgn3Q9DCB1 Gm6461-201ENSMUST00000120015 633 ntBASIC0.43□□□□□ -2.34
Hmgn3Q9DCB1 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Hmgn3Q9DCB1 Gm24747-201ENSMUST00000157835 87 ntBASIC0.43□□□□□ -2.34
Hmgn3Q9DCB1 Gm24323-201ENSMUST00000175342 77 ntBASIC0.43□□□□□ -2.34
Hmgn3Q9DCB1 Gm16399-201ENSMUST00000181423 219 ntBASIC0.43□□□□□ -2.34
Hmgn3Q9DCB1 Gm28000-201ENSMUST00000184380 85 ntBASIC0.43□□□□□ -2.34
Hmgn3Q9DCB1 Gm29005-201ENSMUST00000186773 320 ntBASIC0.43□□□□□ -2.34
Hmgn3Q9DCB1 Gm18357-201ENSMUST00000188184 580 ntBASIC0.43□□□□□ -2.34
Hmgn3Q9DCB1 Gm28862-201ENSMUST00000188246 163 ntBASIC0.43□□□□□ -2.34
Hmgn3Q9DCB1 Gm29192-201ENSMUST00000190942 377 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms