Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm15175-201ENSMUST00000117629 132 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm11357-201ENSMUST00000119758 954 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm22159-201ENSMUST00000158412 130 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm24897-201ENSMUST00000179033 107 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm43007-201ENSMUST00000197618 291 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm43587-201ENSMUST00000199590 204 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm44524-201ENSMUST00000203899 271 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm44609-201ENSMUST00000207157 460 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.03□□□□□ -2.08
Cdc40Q9DC48 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.03□□□□□ -2.08
Cdc40Q9DC48 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm22247-201ENSMUST00000082476 131 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm22578-201ENSMUST00000083730 107 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm25257-201ENSMUST00000083907 110 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Cdc40Q9DC48 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm26077-201ENSMUST00000104064 123 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm12941-201ENSMUST00000117934 220 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm36966-201ENSMUST00000192217 413 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm44083-201ENSMUST00000203114 337 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm19140-201ENSMUST00000209790 421 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.02□□□□□ -2.09
Cdc40Q9DC48 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm46146-201ENSMUST00000217483 346 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm25796-201ENSMUST00000082645 163 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Zfp640-202ENSMUST00000224116 1562 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.02□□□□□ -2.09
Cdc40Q9DC48 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm14292-201ENSMUST00000118761 456 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm13588-201ENSMUST00000120026 135 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm11363-201ENSMUST00000121672 548 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm23324-201ENSMUST00000157421 131 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm17377-201ENSMUST00000165184 207 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm5329-201ENSMUST00000186898 463 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm42739-201ENSMUST00000200687 226 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm44961-201ENSMUST00000207450 196 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Gm17991-201ENSMUST00000208139 297 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Cdc40Q9DC48 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Cdc40Q9DC48 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Cdc40Q9DC48 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Olfr197-201ENSMUST00000080031 926 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.01□□□□□ -2.09
Cdc40Q9DC48 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm3081-201ENSMUST00000193413 3025 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm12871-201ENSMUST00000118758 438 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm14748-201ENSMUST00000119819 411 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm9225-201ENSMUST00000121921 836 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm25335-201ENSMUST00000158043 103 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm24768-201ENSMUST00000158512 94 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm25451-201ENSMUST00000177832 121 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm21744-201ENSMUST00000178403 662 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm21171-201ENSMUST00000180048 673 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm27245-201ENSMUST00000184385 376 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm29413-201ENSMUST00000186019 880 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm28700-201ENSMUST00000187614 579 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm29639-201ENSMUST00000188375 580 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm28843-201ENSMUST00000189198 678 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm29546-201ENSMUST00000191171 678 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm37377-201ENSMUST00000191733 304 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm37946-201ENSMUST00000192064 347 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm19089-201ENSMUST00000197207 613 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm45232-201ENSMUST00000207811 162 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm45101-201ENSMUST00000208327 232 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm45772-201ENSMUST00000212961 240 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2□□□□□ -2.09
Cdc40Q9DC48 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm17890-201ENSMUST00000221419 757 ntBASIC2□□□□□ -2.09
Cdc40Q9DC48 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2□□□□□ -2.09
Cdc40Q9DC48 Gm18617-201ENSMUST00000222311 259 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms