Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm3333-202ENSMUST00000221763 1044 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Mir410-201ENSMUST00000083563 81 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 Gm25007-201ENSMUST00000083808 133 ntBASIC1.81□□□□□ -2.12
Ccdc3Q9D6Y1 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Mir883a-201ENSMUST00000104824 76 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm15896-201ENSMUST00000118045 440 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm24840-201ENSMUST00000122603 147 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm22452-201ENSMUST00000122804 104 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm17161-201ENSMUST00000169187 524 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm8207-201ENSMUST00000171204 502 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm24264-201ENSMUST00000179835 94 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm43286-201ENSMUST00000197420 424 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Igkv13-82-201ENSMUST00000200308 346 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm24948-201ENSMUST00000082866 207 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm24610-201ENSMUST00000083270 109 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ccdc3Q9D6Y1 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm23766-201ENSMUST00000103894 80 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm11219-201ENSMUST00000118565 358 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm13510-201ENSMUST00000118659 429 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm26256-201ENSMUST00000122499 186 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm24770-201ENSMUST00000158505 92 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm24885-201ENSMUST00000158783 270 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm21726-201ENSMUST00000179654 392 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm37743-201ENSMUST00000194645 376 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Gm23733-201ENSMUST00000083750 106 ntBASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Ccdc3Q9D6Y1 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm13331-201ENSMUST00000117500 448 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm11784-201ENSMUST00000118568 474 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm12016-201ENSMUST00000119079 681 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm14599-201ENSMUST00000120469 474 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm12045-201ENSMUST00000122122 573 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm15692-201ENSMUST00000152173 352 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm24908-201ENSMUST00000157294 127 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm25334-201ENSMUST00000158036 110 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm43402-201ENSMUST00000197159 159 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm43955-201ENSMUST00000204332 142 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 CT030684.2-201ENSMUST00000228946 826 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Snord14d-201ENSMUST00000083424 86 ntBASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Ccdc3Q9D6Y1 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm24907-201ENSMUST00000116932 128 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm15112-201ENSMUST00000120152 860 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm12096-201ENSMUST00000121149 829 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm14629-201ENSMUST00000122428 144 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm24716-201ENSMUST00000157524 104 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm24754-201ENSMUST00000177997 107 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm27676-201ENSMUST00000183669 61 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm43171-201ENSMUST00000199882 291 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm8940-201ENSMUST00000212585 219 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm18488-201ENSMUST00000215082 364 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm20304-201ENSMUST00000218168 444 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.77□□□□□ -2.13
Ccdc3Q9D6Y1 Gm12825-201ENSMUST00000120249 563 ntBASIC1.76□□□□□ -2.13
Ccdc3Q9D6Y1 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.76□□□□□ -2.13
Ccdc3Q9D6Y1 Gm25051-201ENSMUST00000158602 249 ntBASIC1.76□□□□□ -2.13
Ccdc3Q9D6Y1 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.76□□□□□ -2.13
Ccdc3Q9D6Y1 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.76□□□□□ -2.13
Ccdc3Q9D6Y1 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
Ccdc3Q9D6Y1 Gm27544-201ENSMUST00000185069 155 ntBASIC1.76□□□□□ -2.13
Ccdc3Q9D6Y1 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Ccdc3Q9D6Y1 Gm37455-201ENSMUST00000191993 529 ntBASIC1.76□□□□□ -2.13
Ccdc3Q9D6Y1 Gm43676-201ENSMUST00000197532 540 ntBASIC1.76□□□□□ -2.13
Ccdc3Q9D6Y1 Gm44459-201ENSMUST00000203926 160 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 145.3 ms