Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Gm22577-201ENSMUST00000083731 109 ntBASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ddx28Q9CWT6 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Mir878-201ENSMUST00000104680 78 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm11386-201ENSMUST00000117761 347 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm5937-201ENSMUST00000119715 643 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm22187-201ENSMUST00000157819 129 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm23411-201ENSMUST00000157988 62 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm22257-201ENSMUST00000158687 301 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm37353-201ENSMUST00000194497 313 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm38109-201ENSMUST00000195386 181 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm42925-201ENSMUST00000197359 285 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm43007-201ENSMUST00000197618 291 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Mir691-201ENSMUST00000199719 78 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm43746-201ENSMUST00000200028 317 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm44964-201ENSMUST00000207011 273 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Olfr575-201ENSMUST00000084812 957 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm14390-201ENSMUST00000117505 1695 ntBASIC2.73□□□□□ -1.97
Ddx28Q9CWT6 Gm25308-201ENSMUST00000104171 158 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm26341-201ENSMUST00000104561 134 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm26473-201ENSMUST00000116763 127 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm22486-201ENSMUST00000116815 137 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm14897-201ENSMUST00000118213 207 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm13876-201ENSMUST00000118451 261 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm14852-201ENSMUST00000120065 647 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm12723-201ENSMUST00000120700 451 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm12779-201ENSMUST00000121496 143 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm23000-201ENSMUST00000157083 139 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm23956-201ENSMUST00000157211 119 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm23752-201ENSMUST00000157584 115 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm23016-201ENSMUST00000158431 62 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Mir5101-201ENSMUST00000175181 83 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm26928-201ENSMUST00000182674 572 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm27783-201ENSMUST00000183534 105 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm29350-201ENSMUST00000189141 541 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm44336-201ENSMUST00000203696 468 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm45395-201ENSMUST00000209891 559 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm24037-201ENSMUST00000082871 180 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Mir184-201ENSMUST00000083662 69 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
Ddx28Q9CWT6 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm13806-201ENSMUST00000117822 325 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm23213-201ENSMUST00000122715 313 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm26278-201ENSMUST00000157098 132 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm24419-201ENSMUST00000157875 332 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm27330-201ENSMUST00000184689 132 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm28628-201ENSMUST00000187006 264 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm28629-201ENSMUST00000187309 263 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm33354-201ENSMUST00000195448 906 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm5034-201ENSMUST00000199115 634 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm43217-201ENSMUST00000199513 367 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm25203-202ENSMUST00000200458 216 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm25135-201ENSMUST00000082648 143 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm25203-201ENSMUST00000082842 215 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Gm23042-201ENSMUST00000083866 101 ntBASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Ddx28Q9CWT6 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Ddx28Q9CWT6 Gm22656-201ENSMUST00000104199 171 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms