Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm9593-201ENSMUST00000166034 469 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm20794-201ENSMUST00000177626 628 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm21744-201ENSMUST00000178403 662 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm25156-201ENSMUST00000179809 79 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm21171-201ENSMUST00000180048 673 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm27959-201ENSMUST00000185172 111 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm28283-201ENSMUST00000185509 178 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm29413-201ENSMUST00000186019 880 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm28356-202ENSMUST00000187566 858 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm28700-201ENSMUST00000187614 579 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm29639-201ENSMUST00000188375 580 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm28843-201ENSMUST00000189198 678 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm20885-201ENSMUST00000190192 654 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm29546-201ENSMUST00000191171 678 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm36866-201ENSMUST00000193343 657 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm36047-201ENSMUST00000193659 657 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm20857-201ENSMUST00000194766 657 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm20858-201ENSMUST00000195459 657 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm37029-201ENSMUST00000195773 239 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm43550-201ENSMUST00000200597 303 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm45590-201ENSMUST00000209715 262 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Gm23503-201ENSMUST00000083903 107 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.69□□□□□ -1.98
Smc1aQ9CU62 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.69□□□□□ -1.98
Smc1aQ9CU62 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm12393-201ENSMUST00000117084 848 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm13356-201ENSMUST00000121678 335 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm22733-201ENSMUST00000158094 91 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm25866-201ENSMUST00000158245 112 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm24210-201ENSMUST00000158263 133 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Mir1927-201ENSMUST00000158579 109 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm15900-201ENSMUST00000161584 342 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm16232-201ENSMUST00000162856 167 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm24304-201ENSMUST00000177635 107 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm2719-201ENSMUST00000191929 444 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm36984-201ENSMUST00000192770 235 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm42509-201ENSMUST00000197390 781 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm44524-201ENSMUST00000203899 271 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Smc1aQ9CU62 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.68□□□□□ -1.98
Smc1aQ9CU62 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Mir423-201ENSMUST00000083584 109 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.68□□□□□ -1.98
Smc1aQ9CU62 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Gm26384-201ENSMUST00000102183 110 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Mir7667-201ENSMUST00000183866 63 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Gm27245-201ENSMUST00000184385 376 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Gm37455-201ENSMUST00000191993 529 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Mir7232-201ENSMUST00000197929 74 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Mir3069-201ENSMUST00000198802 65 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Gm45232-201ENSMUST00000207811 162 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Gm45678-201ENSMUST00000210509 295 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Gm8940-201ENSMUST00000212585 219 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 Gm18703-201ENSMUST00000215318 333 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 CT025538.2-201ENSMUST00000226083 772 ntBASIC2.67□□□□□ -1.98
Smc1aQ9CU62 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm23551-201ENSMUST00000116852 121 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm25321-201ENSMUST00000122558 102 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm23352-201ENSMUST00000158428 64 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm24771-201ENSMUST00000158508 137 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Mir5101-201ENSMUST00000175181 83 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm24713-201ENSMUST00000178850 107 ntBASIC2.66□□□□□ -1.98
Smc1aQ9CU62 Gm25448-201ENSMUST00000180065 107 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms