Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm7065-201ENSMUST00000222150 474 ntBASIC4.56□□□□□ -1.68
Trim11Q99PQ2 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.56□□□□□ -1.68
Trim11Q99PQ2 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.56□□□□□ -1.68
Trim11Q99PQ2 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Trim11Q99PQ2 Gm22061-201ENSMUST00000082557 107 ntBASIC4.56□□□□□ -1.68
Trim11Q99PQ2 Gm23650-201ENSMUST00000083355 70 ntBASIC4.56□□□□□ -1.68
Trim11Q99PQ2 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Trim11Q99PQ2 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Trim11Q99PQ2 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Trim11Q99PQ2 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Trim11Q99PQ2 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm7308-201ENSMUST00000121087 447 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm23584-201ENSMUST00000157655 129 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm22447-201ENSMUST00000158155 92 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm27733-201ENSMUST00000184803 68 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm38270-201ENSMUST00000192721 407 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm9238-201ENSMUST00000196181 329 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.55□□□□□ -1.68
Trim11Q99PQ2 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm26457-201ENSMUST00000082678 78 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm23517-201ENSMUST00000082830 192 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim11Q99PQ2 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm13687-201ENSMUST00000119857 282 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm27286-201ENSMUST00000184934 179 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm28471-201ENSMUST00000185994 615 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm28598-201ENSMUST00000186490 615 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm29268-201ENSMUST00000188669 615 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm29218-205ENSMUST00000190846 615 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm37172-201ENSMUST00000191926 615 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm30341-201ENSMUST00000194363 289 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm37693-201ENSMUST00000194562 234 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm16419-201ENSMUST00000221057 625 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim11Q99PQ2 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm22496-201ENSMUST00000104493 88 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm15313-201ENSMUST00000119179 282 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm11931-201ENSMUST00000121630 447 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm23982-201ENSMUST00000157141 106 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm23585-201ENSMUST00000157656 102 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm22398-201ENSMUST00000174941 125 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm25731-201ENSMUST00000175167 125 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm25534-201ENSMUST00000175365 125 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm42451-201ENSMUST00000197410 244 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Mir376a-201ENSMUST00000197584 68 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm45013-201ENSMUST00000206883 178 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm18462-201ENSMUST00000208112 417 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim11Q99PQ2 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Trim11Q99PQ2 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.52□□□□□ -1.69
Trim11Q99PQ2 Mir761-201ENSMUST00000103245 76 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms