Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Gm22572-201ENSMUST00000082985 105 ntBASIC3.37□□□□□ -1.87
Hdac9Q99N13 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm25315-201ENSMUST00000116823 121 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm14670-201ENSMUST00000117327 337 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Mir1898-201ENSMUST00000122643 83 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Hdac9Q99N13 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm22491-201ENSMUST00000157190 102 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm24358-201ENSMUST00000158424 288 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm24681-201ENSMUST00000158760 107 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm17538-201ENSMUST00000168236 327 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Mir7013-201ENSMUST00000183540 72 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm43035-201ENSMUST00000197626 517 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.36□□□□□ -1.87
Hdac9Q99N13 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Hdac9Q99N13 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Ear14-201ENSMUST00000049559 468 ntBASIC3.36□□□□□ -1.87
Hdac9Q99N13 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm22496-201ENSMUST00000104493 88 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm14448-201ENSMUST00000116383 210 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm14307-201ENSMUST00000118930 291 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm14574-201ENSMUST00000120644 279 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 DQ267100-201ENSMUST00000122600 72 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm14297-201ENSMUST00000129110 291 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm20718-201ENSMUST00000176058 259 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm25175-201ENSMUST00000178712 79 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.35□□□□□ -1.87
Hdac9Q99N13 Mir7242-201ENSMUST00000183710 79 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.35□□□□□ -1.87
Hdac9Q99N13 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm45232-201ENSMUST00000207811 162 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm7422-201ENSMUST00000220115 640 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Hdac9Q99N13 AC192333.1-201ENSMUST00000224573 376 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm23423-201ENSMUST00000082782 106 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Mir137-201ENSMUST00000083635 73 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm10343-201ENSMUST00000096279 348 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm23741-201ENSMUST00000097237 171 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
Hdac9Q99N13 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hdac9Q99N13 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
Hdac9Q99N13 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Hdac9Q99N13 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.35□□□□□ -1.87
Hdac9Q99N13 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm15899-201ENSMUST00000128586 238 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm26099-201ENSMUST00000157248 109 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm25706-201ENSMUST00000157828 247 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm24922-201ENSMUST00000158511 102 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm9071-201ENSMUST00000165915 474 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm25156-201ENSMUST00000179809 79 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm37743-201ENSMUST00000194645 376 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm43991-201ENSMUST00000203751 274 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm43955-201ENSMUST00000204332 142 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm45590-201ENSMUST00000209715 262 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.34□□□□□ -1.87
Hdac9Q99N13 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm24268-201ENSMUST00000082990 110 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm22364-201ENSMUST00000083097 98 ntBASIC3.34□□□□□ -1.87
Hdac9Q99N13 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.34□□□□□ -1.88
Hdac9Q99N13 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Hdac9Q99N13 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Hdac9Q99N13 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Hdac9Q99N13 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.34□□□□□ -1.88
Hdac9Q99N13 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Hdac9Q99N13 Mir878-201ENSMUST00000104680 78 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm14558-201ENSMUST00000117458 381 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm15399-201ENSMUST00000118055 724 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm14897-201ENSMUST00000118213 207 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm11582-201ENSMUST00000121041 236 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm8880-201ENSMUST00000121800 454 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm16218-201ENSMUST00000155424 388 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm26275-201ENSMUST00000157101 268 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm25909-201ENSMUST00000157619 121 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm24240-201ENSMUST00000157785 135 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm24853-201ENSMUST00000158026 121 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm23024-201ENSMUST00000158770 292 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm25707-201ENSMUST00000175120 96 ntBASIC3.33□□□□□ -1.88
Hdac9Q99N13 Gm20660-201ENSMUST00000177515 289 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms