Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm23078-201ENSMUST00000157848 148 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm16232-201ENSMUST00000162856 167 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm29640-201ENSMUST00000187972 278 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm38311-201ENSMUST00000192945 165 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm37757-201ENSMUST00000193072 210 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm43587-201ENSMUST00000199590 204 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm8041-201ENSMUST00000199755 616 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm45678-201ENSMUST00000210509 295 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm3442-201ENSMUST00000216808 710 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cstf1Q99LC2 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cstf1Q99LC2 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm23096-201ENSMUST00000083447 107 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cstf1Q99LC2 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Cstf1Q99LC2 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cstf1Q99LC2 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm25094-201ENSMUST00000103992 131 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm24907-201ENSMUST00000116932 128 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm5396-201ENSMUST00000121222 532 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm23289-201ENSMUST00000175615 108 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm25670-201ENSMUST00000178423 107 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm26239-201ENSMUST00000178842 107 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm24267-201ENSMUST00000179841 107 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm27245-201ENSMUST00000184385 376 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm37037-201ENSMUST00000194475 424 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm5471-201ENSMUST00000072732 337 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm24292-201ENSMUST00000082888 107 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Cstf1Q99LC2 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm26384-201ENSMUST00000102183 110 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm13728-201ENSMUST00000117471 400 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm6444-201ENSMUST00000119611 458 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm16428-201ENSMUST00000121193 723 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm2830-201ENSMUST00000140330 385 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm24439-201ENSMUST00000157894 117 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm3111-201ENSMUST00000167426 490 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm17064-201ENSMUST00000167690 452 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm28299-201ENSMUST00000189908 339 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm43402-201ENSMUST00000197159 159 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm44408-201ENSMUST00000200205 66 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm44472-201ENSMUST00000204922 943 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm44555-201ENSMUST00000209008 148 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm22508-201ENSMUST00000082772 110 ntBASIC2.36□□□□□ -2.03
Cstf1Q99LC2 Gm14073-201ENSMUST00000117344 381 ntBASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Gm15175-201ENSMUST00000117629 132 ntBASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Gm15106-201ENSMUST00000119691 821 ntBASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Gm29429-201ENSMUST00000187071 121 ntBASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Gm43669-201ENSMUST00000198229 436 ntBASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Gm42857-201ENSMUST00000200823 339 ntBASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Gm29848-201ENSMUST00000203107 295 ntBASIC2.35□□□□□ -2.03
Cstf1Q99LC2 Gm44282-201ENSMUST00000203199 190 ntBASIC2.35□□□□□ -2.03
Cstf1Q99LC2 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms