Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.53□□□□□ -1.85
Clrn1Q8K445 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Clrn1Q8K445 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Snord72-201ENSMUST00000104549 81 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm23988-201ENSMUST00000117034 122 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm14562-201ENSMUST00000129885 543 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm23585-201ENSMUST00000157656 102 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm25384-201ENSMUST00000157807 105 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm20450-201ENSMUST00000173652 147 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm20693-201ENSMUST00000177431 211 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm22911-201ENSMUST00000177920 107 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm44977-201ENSMUST00000205283 420 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm45380-201ENSMUST00000210465 315 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.52□□□□□ -1.85
Clrn1Q8K445 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.52□□□□□ -1.85
Clrn1Q8K445 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Clrn1Q8K445 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
Clrn1Q8K445 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Clrn1Q8K445 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Clrn1Q8K445 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm24544-201ENSMUST00000103862 110 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm26418-201ENSMUST00000104275 137 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm25875-201ENSMUST00000104323 107 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm23836-201ENSMUST00000104434 129 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Mir466h-201ENSMUST00000104748 81 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm15896-201ENSMUST00000118045 440 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm11572-201ENSMUST00000119164 120 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm22986-201ENSMUST00000122753 130 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm26275-201ENSMUST00000157101 268 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm23901-201ENSMUST00000157570 107 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm24997-201ENSMUST00000157910 105 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm10357-201ENSMUST00000159886 264 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm20630-201ENSMUST00000177387 551 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Mir6336-201ENSMUST00000183581 130 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm27718-201ENSMUST00000183721 86 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm29408-201ENSMUST00000187536 216 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm45553-201ENSMUST00000209929 507 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm45859-201ENSMUST00000212794 214 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm3829-201ENSMUST00000222362 619 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Clrn1Q8K445 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.51□□□□□ -1.85
Clrn1Q8K445 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
Clrn1Q8K445 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Clrn1Q8K445 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Mir881-201ENSMUST00000104844 78 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm26187-201ENSMUST00000157693 101 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm23641-201ENSMUST00000157857 101 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm22531-201ENSMUST00000158819 140 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm25749-201ENSMUST00000175485 111 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm20660-201ENSMUST00000177515 289 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm37713-201ENSMUST00000191746 198 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Mir7682-201ENSMUST00000198467 58 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm44010-201ENSMUST00000204432 331 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm45539-201ENSMUST00000210313 428 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.5□□□□□ -1.85
Clrn1Q8K445 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm9818-201ENSMUST00000050900 255 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Snord21-201ENSMUST00000082519 94 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm24457-201ENSMUST00000083196 105 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Mir32-201ENSMUST00000083610 70 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.5□□□□□ -1.85
Clrn1Q8K445 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Clrn1Q8K445 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Clrn1Q8K445 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Clrn1Q8K445 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Clrn1Q8K445 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Clrn1Q8K445 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Clrn1Q8K445 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Clrn1Q8K445 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.49□□□□□ -1.85
Clrn1Q8K445 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Clrn1Q8K445 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.49□□□□□ -1.85
Clrn1Q8K445 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms