Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Gm22963-201ENSMUST00000157960 91 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Gm5329-201ENSMUST00000186898 463 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Gm44524-201ENSMUST00000203899 271 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Gm44182-201ENSMUST00000204052 115 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Gm18453-201ENSMUST00000208000 626 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Gm26055-201ENSMUST00000083038 107 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Mir107-201ENSMUST00000083660 87 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.62□□□□□ -2.15
Ccdc28aQ8CEI3 Gm13728-201ENSMUST00000117471 400 ntBASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Gm25621-201ENSMUST00000157223 114 ntBASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Gm26024-201ENSMUST00000158657 322 ntBASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Mir7081-201ENSMUST00000184490 75 ntBASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Gm44256-201ENSMUST00000203304 335 ntBASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.61□□□□□ -2.15
Ccdc28aQ8CEI3 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm11786-201ENSMUST00000120799 155 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm24840-201ENSMUST00000122603 147 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm24358-201ENSMUST00000158424 288 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm3102-201ENSMUST00000164236 489 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm20415-201ENSMUST00000172877 423 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm24264-201ENSMUST00000179835 94 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm11395-201ENSMUST00000181011 499 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm7837-201ENSMUST00000190873 412 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Igkv13-82-201ENSMUST00000200308 346 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm42739-201ENSMUST00000200687 226 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm45912-201ENSMUST00000210646 543 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Gm26437-201ENSMUST00000082595 105 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Snora33-201ENSMUST00000093556 129 ntBASIC1.6□□□□□ -2.15
Ccdc28aQ8CEI3 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm23109-201ENSMUST00000116867 126 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm12765-201ENSMUST00000117273 615 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm9703-201ENSMUST00000119573 343 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm15115-201ENSMUST00000121145 264 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm22793-201ENSMUST00000157227 330 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm24056-201ENSMUST00000158617 146 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm24222-201ENSMUST00000158834 93 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Mir6352-201ENSMUST00000184495 116 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Mir7241-201ENSMUST00000184532 64 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm29429-201ENSMUST00000187071 121 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm18775-201ENSMUST00000190763 586 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm38149-201ENSMUST00000191943 339 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Mir378a-201ENSMUST00000198300 66 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm35558-202ENSMUST00000221819 499 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm24622-201ENSMUST00000082619 162 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm26203-201ENSMUST00000082911 114 ntBASIC1.59□□□□□ -2.15
Ccdc28aQ8CEI3 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.59□□□□□ -2.16
Ccdc28aQ8CEI3 Gm24895-201ENSMUST00000122742 74 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm21758-201ENSMUST00000179336 819 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm29647-201ENSMUST00000188795 666 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm20832-201ENSMUST00000189076 665 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm28241-201ENSMUST00000190916 235 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm28504-201ENSMUST00000190977 666 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm31511-201ENSMUST00000193134 657 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Gm35843-201ENSMUST00000193716 666 ntBASIC1.58□□□□□ -2.16
Ccdc28aQ8CEI3 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms