Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Gm44824-201ENSMUST00000207021 229 ntBASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Gm44657-201ENSMUST00000208568 450 ntBASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Gm35405-201ENSMUST00000218754 400 ntBASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Snord35b-201ENSMUST00000082833 87 ntBASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Gm24764-201ENSMUST00000083686 199 ntBASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Trerf1Q8BXJ2 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm13343-201ENSMUST00000116474 105 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm12213-201ENSMUST00000119924 353 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm12858-201ENSMUST00000121913 208 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm25339-201ENSMUST00000157458 232 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm23667-201ENSMUST00000157466 120 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm24857-201ENSMUST00000158061 310 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm24730-201ENSMUST00000158228 117 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm22611-201ENSMUST00000158288 150 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm22910-201ENSMUST00000178568 132 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm29429-201ENSMUST00000187071 121 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm38167-201ENSMUST00000195704 1178 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm43955-201ENSMUST00000204332 142 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm44030-201ENSMUST00000204865 432 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm45730-201ENSMUST00000212560 395 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm19326-201ENSMUST00000219818 326 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Gm4987-201ENSMUST00000078326 408 ntBASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trerf1Q8BXJ2 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Mir687-201ENSMUST00000102166 89 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm12765-201ENSMUST00000117273 615 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm12025-201ENSMUST00000117768 144 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm11456-201ENSMUST00000121070 256 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm24936-201ENSMUST00000122598 247 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm25391-201ENSMUST00000157342 134 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm24409-201ENSMUST00000157881 152 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm25198-201ENSMUST00000178574 110 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm26180-201ENSMUST00000179942 107 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm24415-201ENSMUST00000180218 107 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm27694-201ENSMUST00000184740 86 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm28069-201ENSMUST00000189926 214 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm7858-201ENSMUST00000190177 622 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm6510-201ENSMUST00000195916 574 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm43115-201ENSMUST00000196244 160 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm32381-201ENSMUST00000203192 476 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm45778-201ENSMUST00000211959 153 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm23850-201ENSMUST00000083830 169 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trerf1Q8BXJ2 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm24982-201ENSMUST00000104456 132 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Mir743b-201ENSMUST00000104751 77 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm13085-201ENSMUST00000118356 171 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm12646-201ENSMUST00000119144 238 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm13717-201ENSMUST00000119868 365 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm12876-201ENSMUST00000120975 408 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm23168-201ENSMUST00000157156 143 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm23671-201ENSMUST00000157472 103 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm22842-201ENSMUST00000157709 118 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm23865-201ENSMUST00000157723 97 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm24499-201ENSMUST00000158446 104 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm17072-201ENSMUST00000166673 658 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Mir5099-201ENSMUST00000175257 74 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm29231-201ENSMUST00000179850 319 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm28755-201ENSMUST00000185773 199 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm28995-201ENSMUST00000186625 261 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm28951-201ENSMUST00000190742 313 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 AC154328.1-201ENSMUST00000225875 307 ntBASIC3.46□□□□□ -1.86
Trerf1Q8BXJ2 Gm23679-201ENSMUST00000083161 119 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms