Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm14835-201ENSMUST00000119039 315 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm14852-201ENSMUST00000120065 647 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm13903-201ENSMUST00000120945 193 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm14713-201ENSMUST00000122362 686 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm23111-201ENSMUST00000122652 105 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm24910-201ENSMUST00000157289 272 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm23324-201ENSMUST00000157421 131 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm24210-201ENSMUST00000158263 133 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm24922-201ENSMUST00000158511 102 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm21673-201ENSMUST00000186640 436 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm21135-201ENSMUST00000189023 436 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm28466-201ENSMUST00000190678 659 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm43708-201ENSMUST00000198857 961 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm43810-201ENSMUST00000201018 232 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm25402-201ENSMUST00000082966 131 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Gm23040-201ENSMUST00000083869 163 ntBASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Ccdc40Q8BI79 Mir344c-201ENSMUST00000103919 92 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm15714-201ENSMUST00000117168 250 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm15844-201ENSMUST00000118016 576 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm12550-201ENSMUST00000118478 329 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm25335-201ENSMUST00000158043 103 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm23068-201ENSMUST00000158239 293 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm24768-201ENSMUST00000158512 94 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm24306-201ENSMUST00000180229 79 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Mir6916-201ENSMUST00000184514 63 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm9318-201ENSMUST00000222444 438 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm26446-201ENSMUST00000082455 103 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.44□□□□□ -2.02
Ccdc40Q8BI79 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm14932-201ENSMUST00000117112 453 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm11352-201ENSMUST00000119264 517 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm14748-201ENSMUST00000119819 411 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm14333-201ENSMUST00000130484 264 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm22236-201ENSMUST00000157093 106 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm26173-201ENSMUST00000158416 136 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm25996-201ENSMUST00000175393 117 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm27659-201ENSMUST00000183472 98 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Mir6993-201ENSMUST00000184912 65 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm37438-201ENSMUST00000192813 393 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm37353-201ENSMUST00000194497 313 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm6059-201ENSMUST00000196903 340 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm43004-201ENSMUST00000201872 703 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm18160-201ENSMUST00000214279 827 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Snord14d-201ENSMUST00000083424 86 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Mir452-201ENSMUST00000093629 85 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Gm24817-201ENSMUST00000093672 105 ntBASIC2.43□□□□□ -2.02
Ccdc40Q8BI79 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm23803-201ENSMUST00000104610 132 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm22091-201ENSMUST00000116908 127 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm15659-201ENSMUST00000118881 341 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm13059-201ENSMUST00000119881 398 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm25808-201ENSMUST00000122784 284 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm22083-201ENSMUST00000157586 102 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm25066-201ENSMUST00000158145 123 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm22534-201ENSMUST00000158173 104 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm25866-201ENSMUST00000158245 112 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm18396-201ENSMUST00000177095 361 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm21894-201ENSMUST00000179631 546 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm44024-201ENSMUST00000203008 476 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm7946-201ENSMUST00000203326 958 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm44161-201ENSMUST00000203532 253 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Gm46389-201ENSMUST00000223199 392 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Mir93-201ENSMUST00000083593 88 ntBASIC2.42□□□□□ -2.02
Ccdc40Q8BI79 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm15878-201ENSMUST00000127561 306 ntBASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm27028-201ENSMUST00000182303 399 ntBASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm29604-201ENSMUST00000187176 163 ntBASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm37946-201ENSMUST00000192064 347 ntBASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Trbv18-201ENSMUST00000194256 294 ntBASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm9236-201ENSMUST00000196892 587 ntBASIC2.41□□□□□ -2.02
Ccdc40Q8BI79 Gm42164-201ENSMUST00000198881 379 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms