Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Scn10aQ6QIY3 Gm42834-201ENSMUST00000196845 256 ntBASIC1.58□□□□□ -2.16
Scn10aQ6QIY3 Gm6059-201ENSMUST00000196903 340 ntBASIC1.58□□□□□ -2.16
Scn10aQ6QIY3 Gm20948-201ENSMUST00000211091 449 ntBASIC1.58□□□□□ -2.16
Scn10aQ6QIY3 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Scn10aQ6QIY3 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Scn10aQ6QIY3 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.58□□□□□ -2.16
Scn10aQ6QIY3 Mir211-201ENSMUST00000083651 106 ntBASIC1.58□□□□□ -2.16
Scn10aQ6QIY3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Scn10aQ6QIY3 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 Gm13806-201ENSMUST00000117822 325 ntBASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 Gm14918-201ENSMUST00000118153 268 ntBASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 Gm11352-201ENSMUST00000119264 517 ntBASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 Gm23324-201ENSMUST00000157421 131 ntBASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 Gm23559-201ENSMUST00000157824 103 ntBASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 Gm45530-201ENSMUST00000211658 225 ntBASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 Gm26055-201ENSMUST00000083038 107 ntBASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.57□□□□□ -2.16
Scn10aQ6QIY3 Gm22270-201ENSMUST00000104034 132 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm6954-201ENSMUST00000117416 225 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm13359-201ENSMUST00000119000 695 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm14748-201ENSMUST00000119819 411 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm44458-201ENSMUST00000196594 143 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm14815-201ENSMUST00000120060 488 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 n-R5s192-201ENSMUST00000122577 119 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm22483-201ENSMUST00000157986 274 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm18964-201ENSMUST00000193013 563 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm43739-201ENSMUST00000198294 307 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm24445-201ENSMUST00000083981 107 ntBASIC1.56□□□□□ -2.16
Scn10aQ6QIY3 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 Gm15029-201ENSMUST00000119742 199 ntBASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 Gm5646-201ENSMUST00000120568 714 ntBASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 Gm24677-201ENSMUST00000158755 150 ntBASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 Gm43978-201ENSMUST00000203491 451 ntBASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 Gm46193-201ENSMUST00000219399 364 ntBASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 Gm44708-201ENSMUST00000205580 2237 ntBASIC1.55□□□□□ -2.16
Scn10aQ6QIY3 Gm11384-201ENSMUST00000121376 303 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm16359-201ENSMUST00000124511 289 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm43894-201ENSMUST00000203274 688 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 AC073947.3-201ENSMUST00000215576 766 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm18039-201ENSMUST00000217816 728 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Mir137-201ENSMUST00000083635 73 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm23587-201ENSMUST00000157658 84 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm22693-201ENSMUST00000175049 442 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Mir3473c-201ENSMUST00000175262 81 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm42924-201ENSMUST00000197261 185 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm8041-201ENSMUST00000199755 616 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm6109-201ENSMUST00000223297 348 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 AC133654.1-201ENSMUST00000228411 672 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Gm26128-201ENSMUST00000083170 110 ntBASIC1.54□□□□□ -2.16
Scn10aQ6QIY3 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Scn10aQ6QIY3 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Scn10aQ6QIY3 Gm9071-201ENSMUST00000165915 474 ntBASIC1.53□□□□□ -2.16
Scn10aQ6QIY3 Gm33354-201ENSMUST00000195448 906 ntBASIC1.53□□□□□ -2.16
Scn10aQ6QIY3 Gm43510-201ENSMUST00000197922 353 ntBASIC1.53□□□□□ -2.16
Scn10aQ6QIY3 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.53□□□□□ -2.16
Scn10aQ6QIY3 AC151902.1-201ENSMUST00000227800 375 ntBASIC1.53□□□□□ -2.16
Scn10aQ6QIY3 Gm23058-201ENSMUST00000093703 107 ntBASIC1.53□□□□□ -2.16
Scn10aQ6QIY3 Gm24049-201ENSMUST00000102409 100 ntBASIC1.52□□□□□ -2.17
Scn10aQ6QIY3 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Scn10aQ6QIY3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.52□□□□□ -2.17
Scn10aQ6QIY3 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.52□□□□□ -2.17
Scn10aQ6QIY3 Gm25368-201ENSMUST00000158847 131 ntBASIC1.52□□□□□ -2.17
Scn10aQ6QIY3 Gm22111-201ENSMUST00000178010 79 ntBASIC1.52□□□□□ -2.17
Scn10aQ6QIY3 Gm23687-201ENSMUST00000178664 79 ntBASIC1.52□□□□□ -2.17
Scn10aQ6QIY3 Gm24566-201ENSMUST00000179286 79 ntBASIC1.52□□□□□ -2.17
Scn10aQ6QIY3 Gm23305-201ENSMUST00000179342 79 ntBASIC1.52□□□□□ -2.17
Scn10aQ6QIY3 Gm26389-201ENSMUST00000179819 79 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms