Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Scaf4Q6PFF0 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Scaf4Q6PFF0 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm12982-201ENSMUST00000117408 190 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm13268-201ENSMUST00000117485 433 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm11931-201ENSMUST00000121630 447 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm23957-201ENSMUST00000157209 90 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm2862-201ENSMUST00000161524 328 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm21827-201ENSMUST00000178247 423 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm27285-201ENSMUST00000183875 127 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Mir6335-201ENSMUST00000184081 98 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Mir6410-201ENSMUST00000184204 104 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm18956-201ENSMUST00000192857 480 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm44349-201ENSMUST00000197048 123 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm42526-201ENSMUST00000198956 393 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm44757-201ENSMUST00000206373 157 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm26121-201ENSMUST00000083364 162 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.84□□□□□ -1.79
Scaf4Q6PFF0 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.84□□□□□ -1.8
Scaf4Q6PFF0 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.8
Scaf4Q6PFF0 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Scaf4Q6PFF0 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.84□□□□□ -1.8
Scaf4Q6PFF0 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm22026-201ENSMUST00000122735 281 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm23752-201ENSMUST00000157584 115 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm22098-201ENSMUST00000157930 85 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm26460-201ENSMUST00000175061 126 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm23002-201ENSMUST00000179221 107 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm22450-201ENSMUST00000179641 107 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm25473-201ENSMUST00000180191 107 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Mir7028-201ENSMUST00000185016 64 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm28339-201ENSMUST00000185845 696 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm28057-201ENSMUST00000186603 615 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm28148-201ENSMUST00000186924 697 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm28896-201ENSMUST00000188609 696 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm38107-201ENSMUST00000194873 696 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm44010-201ENSMUST00000204432 331 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm5358-201ENSMUST00000212814 353 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm25147-201ENSMUST00000083030 105 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm26071-201ENSMUST00000083261 107 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Mir30e-201ENSMUST00000083475 92 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm24521-201ENSMUST00000083958 107 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.83□□□□□ -1.8
Scaf4Q6PFF0 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm24469-201ENSMUST00000104487 131 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm11065-201ENSMUST00000111462 228 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm24482-201ENSMUST00000117005 93 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm6829-201ENSMUST00000119858 360 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm12466-201ENSMUST00000121199 620 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm15263-201ENSMUST00000121556 642 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm9003-201ENSMUST00000121810 482 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Mir1947-201ENSMUST00000158235 85 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm25015-201ENSMUST00000158400 128 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm20651-201ENSMUST00000177219 329 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm42451-201ENSMUST00000197410 244 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm25581-201ENSMUST00000083410 164 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm23099-201ENSMUST00000083454 139 ntBASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Scaf4Q6PFF0 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms