Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.05
Ccdc36Q6PDM4 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm23911-201ENSMUST00000104596 134 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm15112-201ENSMUST00000120152 860 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm13913-201ENSMUST00000121126 260 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm15466-201ENSMUST00000122299 333 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm25621-201ENSMUST00000157223 114 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm23559-201ENSMUST00000157824 103 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm24439-201ENSMUST00000157894 117 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm22836-201ENSMUST00000158441 61 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm26215-201ENSMUST00000158584 139 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm24813-201ENSMUST00000175310 84 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm27028-201ENSMUST00000182303 399 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm28755-201ENSMUST00000185773 199 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm37037-201ENSMUST00000194475 424 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm34015-201ENSMUST00000194908 451 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm24350-202ENSMUST00000198309 132 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm19649-201ENSMUST00000201126 822 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm22229-201ENSMUST00000082987 108 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm26055-201ENSMUST00000083038 107 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm25859-201ENSMUST00000083710 91 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.21□□□□□ -2.06
Ccdc36Q6PDM4 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm25466-201ENSMUST00000103995 132 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm14558-201ENSMUST00000117458 381 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm14624-201ENSMUST00000117746 192 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm11598-201ENSMUST00000119257 357 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm13406-201ENSMUST00000121991 256 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm12819-201ENSMUST00000122223 629 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm22718-201ENSMUST00000122701 315 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm25294-201ENSMUST00000122791 104 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm6788-201ENSMUST00000166459 270 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Mir6993-201ENSMUST00000184912 65 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm28169-201ENSMUST00000190342 345 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm37353-201ENSMUST00000194497 313 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm7871-201ENSMUST00000195346 618 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm44609-201ENSMUST00000207157 460 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.2□□□□□ -2.06
Ccdc36Q6PDM4 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Gm25539-201ENSMUST00000116886 122 ntBASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Gm12513-201ENSMUST00000118617 352 ntBASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Gm14694-201ENSMUST00000121856 282 ntBASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Gm15899-201ENSMUST00000128586 238 ntBASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Gm22322-201ENSMUST00000157151 111 ntBASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Gm23668-201ENSMUST00000157465 111 ntBASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Gm23033-201ENSMUST00000157996 134 ntBASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Gm25653-201ENSMUST00000158473 138 ntBASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Gm9071-201ENSMUST00000165915 474 ntBASIC2.19□□□□□ -2.06
Ccdc36Q6PDM4 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms