Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm18964-201ENSMUST00000193013 563 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CtcfQ61164 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC3.34□□□□□ -1.87
CtcfQ61164 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CtcfQ61164 Gm25755-201ENSMUST00000083396 107 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm23848-201ENSMUST00000083826 106 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Gm23851-201ENSMUST00000083831 103 ntBASIC3.34□□□□□ -1.87
CtcfQ61164 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CtcfQ61164 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CtcfQ61164 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CtcfQ61164 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.34□□□□□ -1.88
CtcfQ61164 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
CtcfQ61164 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CtcfQ61164 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CtcfQ61164 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CtcfQ61164 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CtcfQ61164 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CtcfQ61164 Gm14852-201ENSMUST00000120065 647 ntBASIC3.33□□□□□ -1.88
CtcfQ61164 Gm11785-201ENSMUST00000120165 601 ntBASIC3.33□□□□□ -1.88
CtcfQ61164 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.33□□□□□ -1.88
CtcfQ61164 Gm28163-201ENSMUST00000187099 325 ntBASIC3.33□□□□□ -1.88
CtcfQ61164 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.33□□□□□ -1.88
CtcfQ61164 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.33□□□□□ -1.88
CtcfQ61164 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.33□□□□□ -1.88
CtcfQ61164 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.33□□□□□ -1.88
CtcfQ61164 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.33□□□□□ -1.88
CtcfQ61164 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.33□□□□□ -1.88
CtcfQ61164 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.33□□□□□ -1.88
CtcfQ61164 AC122393.3-201ENSMUST00000226343 1059 ntBASIC3.33□□□□□ -1.88
CtcfQ61164 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CtcfQ61164 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CtcfQ61164 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CtcfQ61164 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CtcfQ61164 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CtcfQ61164 Mir499-201ENSMUST00000102357 79 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CtcfQ61164 Gm25943-201ENSMUST00000103791 90 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Mir466b-7-201ENSMUST00000103804 88 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Mir466b-5-201ENSMUST00000103900 88 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm12156-201ENSMUST00000119188 554 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm11384-201ENSMUST00000121376 303 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.32□□□□□ -1.88
CtcfQ61164 Gm23078-201ENSMUST00000157848 148 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm24959-201ENSMUST00000157924 146 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm22675-201ENSMUST00000158430 104 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.32□□□□□ -1.88
CtcfQ61164 Gm23977-201ENSMUST00000177871 74 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Mir466b-4-201ENSMUST00000178801 90 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm25285-201ENSMUST00000178951 90 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm24464-201ENSMUST00000179697 107 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Mir466b-6-201ENSMUST00000180061 90 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Mir466c-2-201ENSMUST00000180211 90 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Mir7k-201ENSMUST00000184115 110 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm28058-201ENSMUST00000186421 264 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm37568-201ENSMUST00000191755 364 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm37455-201ENSMUST00000191993 529 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm38167-201ENSMUST00000195704 1178 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.32□□□□□ -1.88
CtcfQ61164 Gm44161-201ENSMUST00000203532 253 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm43899-201ENSMUST00000203675 246 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm44794-201ENSMUST00000206550 411 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm45687-201ENSMUST00000209454 155 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.32□□□□□ -1.88
CtcfQ61164 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm9765-201ENSMUST00000043170 321 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CtcfQ61164 Gm25856-201ENSMUST00000082786 75 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Mir184-201ENSMUST00000083662 69 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CtcfQ61164 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CtcfQ61164 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CtcfQ61164 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.32□□□□□ -1.88
CtcfQ61164 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CtcfQ61164 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CtcfQ61164 Gm24889-201ENSMUST00000104388 132 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Gm11576-201ENSMUST00000117433 417 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Gm14657-201ENSMUST00000117461 302 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Gm15223-201ENSMUST00000120989 826 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Gm26100-201ENSMUST00000157245 127 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Gm24876-201ENSMUST00000158780 92 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Gm7925-201ENSMUST00000166690 401 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Gm22633-201ENSMUST00000179834 107 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Gm27490-201ENSMUST00000184754 128 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Gm18551-201ENSMUST00000195594 642 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CtcfQ61164 Gm44060-201ENSMUST00000204440 410 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.31□□□□□ -1.88
CtcfQ61164 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms