Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm22508-201ENSMUST00000082772 110 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm24292-201ENSMUST00000082888 107 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm23249-201ENSMUST00000083369 161 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Gm25257-201ENSMUST00000083907 110 ntBASIC2.19□□□□□ -2.06
Usf1Q61069 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Usf1Q61069 Gm25377-201ENSMUST00000104334 129 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm14899-201ENSMUST00000118673 548 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm11556-201ENSMUST00000120751 288 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm12096-201ENSMUST00000121149 829 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.18□□□□□ -2.06
Usf1Q61069 Gm23599-201ENSMUST00000157261 251 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm24177-201ENSMUST00000158927 131 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm6788-201ENSMUST00000166459 270 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Usf1Q61069 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm20794-201ENSMUST00000177626 628 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm21744-201ENSMUST00000178403 662 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm21171-201ENSMUST00000180048 673 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.18□□□□□ -2.06
Usf1Q61069 Mir7026-201ENSMUST00000184384 67 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm27608-201ENSMUST00000184822 162 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm29413-201ENSMUST00000186019 880 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Usf1Q61069 Gm29429-201ENSMUST00000187071 121 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm28700-201ENSMUST00000187614 579 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm29639-201ENSMUST00000188375 580 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm28474-201ENSMUST00000188501 315 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm28843-201ENSMUST00000189198 678 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm28299-201ENSMUST00000189908 339 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm29546-201ENSMUST00000191171 678 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Trbv24-201ENSMUST00000194614 347 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm42647-201ENSMUST00000195939 459 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Usf1Q61069 Gm44478-201ENSMUST00000204875 114 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.18□□□□□ -2.06
Usf1Q61069 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Usf1Q61069 Gm23727-201ENSMUST00000083352 164 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm23247-201ENSMUST00000083373 107 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Mir222-201ENSMUST00000083537 79 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.18□□□□□ -2.06
Usf1Q61069 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.18□□□□□ -2.06
Usf1Q61069 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Usf1Q61069 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm22270-201ENSMUST00000104034 132 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm26147-201ENSMUST00000104479 114 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.17□□□□□ -2.06
Usf1Q61069 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.17□□□□□ -2.06
Usf1Q61069 Gm16355-201ENSMUST00000128606 231 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Usf1Q61069 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Usf1Q61069 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.17□□□□□ -2.06
Usf1Q61069 Gm23033-201ENSMUST00000157996 134 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm22733-201ENSMUST00000158094 91 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Usf1Q61069 Gm3111-201ENSMUST00000167426 490 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.17□□□□□ -2.06
Usf1Q61069 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm23933-201ENSMUST00000178405 79 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Usf1Q61069 Gm29550-201ENSMUST00000185543 285 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.17□□□□□ -2.06
Usf1Q61069 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.17□□□□□ -2.06
Usf1Q61069 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Usf1Q61069 Snord104-201ENSMUST00000083192 70 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 Gm23096-201ENSMUST00000083447 107 ntBASIC2.17□□□□□ -2.06
Usf1Q61069 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Usf1Q61069 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.17□□□□□ -2.06
Usf1Q61069 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.17□□□□□ -2.06
Usf1Q61069 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Usf1Q61069 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Usf1Q61069 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Usf1Q61069 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Usf1Q61069 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm13728-201ENSMUST00000117471 400 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm12513-201ENSMUST00000118617 352 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm26256-201ENSMUST00000122499 186 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
Usf1Q61069 Gm23600-201ENSMUST00000157260 71 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm24475-201ENSMUST00000157435 143 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm22597-201ENSMUST00000157602 80 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm24601-201ENSMUST00000157970 143 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm23068-201ENSMUST00000158239 293 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Usf1Q61069 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.16□□□□□ -2.06
Usf1Q61069 Gm21673-201ENSMUST00000186640 436 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm20058-201ENSMUST00000186939 284 ntBASIC2.16□□□□□ -2.06
Usf1Q61069 Gm21135-201ENSMUST00000189023 436 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms