Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm23184-201ENSMUST00000122594 131 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.02□□□□□ -1.93
ClpbQ60649 Gm22722-201ENSMUST00000157467 132 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Gm24191-201ENSMUST00000157977 122 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Gm22833-201ENSMUST00000158292 132 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Gm23024-201ENSMUST00000158770 292 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Gm20656-201ENSMUST00000176925 518 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Gm23660-201ENSMUST00000178362 79 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Gm24088-201ENSMUST00000179100 79 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
ClpbQ60649 Gm43932-201ENSMUST00000204499 52 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Gm44446-201ENSMUST00000204864 255 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Gm44519-201ENSMUST00000206486 122 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ClpbQ60649 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ClpbQ60649 Gm38388-201ENSMUST00000195569 1430 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.02□□□□□ -1.93
ClpbQ60649 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
ClpbQ60649 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
ClpbQ60649 Gm25308-201ENSMUST00000104171 158 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm24890-201ENSMUST00000104389 102 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm12765-201ENSMUST00000117273 615 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm14670-201ENSMUST00000117327 337 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm14020-201ENSMUST00000118165 662 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm9119-201ENSMUST00000118866 495 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm14877-201ENSMUST00000119803 478 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm13153-201ENSMUST00000120969 637 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm12071-201ENSMUST00000121968 469 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm22791-201ENSMUST00000157232 145 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
ClpbQ60649 Mir5099-201ENSMUST00000175257 74 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm37281-201ENSMUST00000192412 439 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm37054-201ENSMUST00000193481 543 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ClpbQ60649 Gm25475-201ENSMUST00000082825 180 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ClpbQ60649 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ClpbQ60649 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
ClpbQ60649 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
ClpbQ60649 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.01□□□□□ -1.93
ClpbQ60649 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3□□□□□ -1.93
ClpbQ60649 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
ClpbQ60649 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
ClpbQ60649 Gm13761-201ENSMUST00000117238 807 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm12954-201ENSMUST00000118610 611 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm11363-201ENSMUST00000121672 548 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm26149-201ENSMUST00000157432 108 ntBASIC3□□□□□ -1.93
ClpbQ60649 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ClpbQ60649 Gm17062-201ENSMUST00000166987 461 ntBASIC3□□□□□ -1.93
ClpbQ60649 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
ClpbQ60649 Gm20672-201ENSMUST00000176605 261 ntBASIC3□□□□□ -1.93
ClpbQ60649 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3□□□□□ -1.93
ClpbQ60649 Gm26585-201ENSMUST00000180890 630 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm28000-201ENSMUST00000184380 85 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm20885-201ENSMUST00000190192 654 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm37428-201ENSMUST00000193886 137 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm37417-201ENSMUST00000195257 454 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3□□□□□ -1.93
ClpbQ60649 Gm43238-201ENSMUST00000196463 359 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm45395-201ENSMUST00000209891 559 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3□□□□□ -1.93
ClpbQ60649 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3□□□□□ -1.93
ClpbQ60649 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3□□□□□ -1.93
ClpbQ60649 AC153864.2-201ENSMUST00000220424 292 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm7240-201ENSMUST00000220769 664 ntBASIC3□□□□□ -1.93
ClpbQ60649 AC163357.1-201ENSMUST00000220847 233 ntBASIC3□□□□□ -1.93
ClpbQ60649 AC130222.1-201ENSMUST00000221198 256 ntBASIC3□□□□□ -1.93
ClpbQ60649 AC107757.3-201ENSMUST00000226312 535 ntBASIC3□□□□□ -1.93
ClpbQ60649 AC117202.2-201ENSMUST00000226491 1101 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm23404-201ENSMUST00000082543 97 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm26129-201ENSMUST00000082719 107 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm25207-201ENSMUST00000093745 107 ntBASIC3□□□□□ -1.93
ClpbQ60649 Gm45038-201ENSMUST00000207537 3838 ntBASIC3□□□□□ -1.93
ClpbQ60649 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ClpbQ60649 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
ClpbQ60649 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
ClpbQ60649 Snord98-201ENSMUST00000116819 65 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Gm16242-201ENSMUST00000117741 334 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Gm5937-201ENSMUST00000119715 643 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Gm15190-201ENSMUST00000120855 276 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Gm14287-201ENSMUST00000121060 117 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Gm44600-201ENSMUST00000208540 111 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Gm44594-201ENSMUST00000208982 407 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Gm22979-201ENSMUST00000082609 159 ntBASIC2.99□□□□□ -1.93
ClpbQ60649 Gm22806-201ENSMUST00000082738 136 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms