Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm23256-201ENSMUST00000102235 110 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm26140-201ENSMUST00000103807 110 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm12934-201ENSMUST00000119221 343 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm14846-201ENSMUST00000121868 216 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm26186-201ENSMUST00000157689 125 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm22516-201ENSMUST00000158266 124 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm22908-201ENSMUST00000177620 110 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm25198-201ENSMUST00000178574 110 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm7656-201ENSMUST00000182468 1004 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm25202-201ENSMUST00000082838 191 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Gm37296-201ENSMUST00000192728 2922 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 AC173482.1-201ENSMUST00000224494 3815 ntBASIC5.53□□□□□ -1.52
Scaf1Q5U4C3 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.52
Scaf1Q5U4C3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Snord72-201ENSMUST00000104549 81 ntBASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Gm9157-201ENSMUST00000117673 225 ntBASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Gm13355-201ENSMUST00000117996 317 ntBASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Gm22321-201ENSMUST00000157152 104 ntBASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Gm25800-201ENSMUST00000082636 134 ntBASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Scaf1Q5U4C3 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm43751-201ENSMUST00000200275 3071 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Mir466h-201ENSMUST00000104748 81 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm14894-201ENSMUST00000117170 270 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm7123-201ENSMUST00000117647 213 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm12417-201ENSMUST00000119153 403 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm14714-201ENSMUST00000119743 439 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm13210-201ENSMUST00000121483 273 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm15065-201ENSMUST00000121699 273 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm14770-201ENSMUST00000122197 312 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm22984-201ENSMUST00000122751 122 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm23098-201ENSMUST00000157552 299 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm26373-201ENSMUST00000157833 103 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm25369-201ENSMUST00000158848 132 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm26287-201ENSMUST00000158887 81 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm10357-201ENSMUST00000159886 264 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm20542-201ENSMUST00000174582 372 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm23152-201ENSMUST00000175322 116 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Mir5136-201ENSMUST00000175573 76 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm19123-201ENSMUST00000190716 651 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm37449-201ENSMUST00000193016 270 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm18658-201ENSMUST00000195558 270 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm18000-201ENSMUST00000212153 800 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 AC100209.2-201ENSMUST00000224461 451 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 AC129017.1-201ENSMUST00000228363 270 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Gm37045-201ENSMUST00000192016 2463 ntBASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Scaf1Q5U4C3 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm15986-201ENSMUST00000122153 400 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm25392-201ENSMUST00000157335 297 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm28263-201ENSMUST00000185884 400 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm28848-201ENSMUST00000189984 168 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm29140-201ENSMUST00000190187 476 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm29014-201ENSMUST00000191422 326 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm38088-201ENSMUST00000195829 241 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm4248-201ENSMUST00000196905 316 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm9377-201ENSMUST00000207227 623 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm45859-201ENSMUST00000212794 214 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Scaf1Q5U4C3 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Scaf1Q5U4C3 Gm23331-201ENSMUST00000157423 108 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms