Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 n-R5s200-201ENSMUST00000104194 113 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Gm12656-201ENSMUST00000118149 577 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Gm13454-201ENSMUST00000118166 483 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Gm12412-201ENSMUST00000121867 328 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Gm24691-201ENSMUST00000157762 140 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Gm20477-201ENSMUST00000174028 280 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Mir6899-201ENSMUST00000184798 64 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 AC117232.1-201ENSMUST00000197964 119 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Gm44477-201ENSMUST00000199661 110 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Gm18854-201ENSMUST00000211196 329 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 AC027184.1-201ENSMUST00000226991 424 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Gm22997-201ENSMUST00000082845 107 ntBASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Trav3-1Q5R1I8 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm26077-201ENSMUST00000104064 123 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm13482-201ENSMUST00000119842 254 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Mup-ps17-201ENSMUST00000120723 218 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm23752-201ENSMUST00000157584 115 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm26089-201ENSMUST00000157898 107 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm24601-201ENSMUST00000157970 143 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm24314-201ENSMUST00000158274 123 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm22768-201ENSMUST00000158366 153 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm17154-201ENSMUST00000165748 431 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm19898-201ENSMUST00000177490 251 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Mir6370-201ENSMUST00000183510 120 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm29460-201ENSMUST00000188607 714 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm18340-201ENSMUST00000196342 609 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm43402-201ENSMUST00000197159 159 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Gm44654-201ENSMUST00000208052 329 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 AC159246.1-201ENSMUST00000214478 249 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
Trav3-1Q5R1I8 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm12935-201ENSMUST00000119352 246 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm14694-201ENSMUST00000121856 282 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm21816-201ENSMUST00000179255 360 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm27517-201ENSMUST00000184347 236 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm27640-201ENSMUST00000184580 147 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm44181-201ENSMUST00000203106 483 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm31849-201ENSMUST00000220306 375 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 AC183092.2-201ENSMUST00000225542 1153 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 AC137871.2-201ENSMUST00000226482 289 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 AC102603.1-201ENSMUST00000227481 584 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm23299-201ENSMUST00000082708 79 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm22683-201ENSMUST00000082854 137 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.74□□□□□ -2.29
Trav3-1Q5R1I8 Gm14390-201ENSMUST00000117505 1695 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm23948-201ENSMUST00000104030 132 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm22338-201ENSMUST00000157715 129 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm2855-201ENSMUST00000166765 456 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Adgrg4-206ENSMUST00000168724 531 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Mir7020-201ENSMUST00000183787 70 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm28344-201ENSMUST00000185704 279 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm31230-201ENSMUST00000199725 785 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm42960-201ENSMUST00000202160 241 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm44825-201ENSMUST00000207557 150 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm44598-201ENSMUST00000207566 150 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 AC134577.1-201ENSMUST00000227572 295 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm22247-201ENSMUST00000082476 131 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Snora41-201ENSMUST00000082668 132 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm26128-201ENSMUST00000083170 110 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm23650-201ENSMUST00000083355 70 ntBASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.73□□□□□ -2.29
Trav3-1Q5R1I8 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Trav3-1Q5R1I8 Gm22115-201ENSMUST00000103976 133 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms