Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 Snord43-201ENSMUST00000199549 108 ntBASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 Gm19649-201ENSMUST00000201126 822 ntBASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 Gm43955-201ENSMUST00000204332 142 ntBASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 AC147633.1-201ENSMUST00000225134 259 ntBASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav5d-4Q5R1F6 Gm13439-201ENSMUST00000117541 409 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Gm25220-201ENSMUST00000157546 95 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Gm7592-201ENSMUST00000160674 627 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Gm2446-201ENSMUST00000220144 772 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Gm18617-201ENSMUST00000222311 259 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Gm22247-201ENSMUST00000082476 131 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Mir151-201ENSMUST00000083678 68 ntBASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trav5d-4Q5R1F6 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm23951-201ENSMUST00000104029 132 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm13714-201ENSMUST00000117313 221 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm14358-201ENSMUST00000118458 403 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm12881-201ENSMUST00000121191 203 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm23332-201ENSMUST00000157424 275 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm22603-201ENSMUST00000157603 96 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm26181-201ENSMUST00000157687 106 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm26189-201ENSMUST00000179879 107 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm28825-201ENSMUST00000186233 238 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm37993-201ENSMUST00000195301 988 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm45654-201ENSMUST00000210980 123 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 AC154552.5-201ENSMUST00000222352 207 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 AC131068.1-201ENSMUST00000226891 482 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm22443-201ENSMUST00000082890 107 ntBASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trav5d-4Q5R1F6 Gm26396-201ENSMUST00000104093 132 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm12550-201ENSMUST00000118478 329 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm14600-201ENSMUST00000121032 630 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Mup-ps4-201ENSMUST00000151005 539 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Mir1949-201ENSMUST00000157434 141 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm25711-201ENSMUST00000158633 128 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm22527-201ENSMUST00000158816 106 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm25836-201ENSMUST00000158918 123 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm26157-201ENSMUST00000158974 126 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm3102-201ENSMUST00000164236 489 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm24100-201ENSMUST00000178592 79 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Mir6351-201ENSMUST00000183826 99 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Mir7017-201ENSMUST00000184894 62 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm29288-201ENSMUST00000191582 901 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm37743-201ENSMUST00000194645 376 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm43228-201ENSMUST00000200735 264 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm44024-201ENSMUST00000203008 476 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Gm44050-201ENSMUST00000204263 527 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
Trav5d-4Q5R1F6 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm22761-201ENSMUST00000102278 96 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm11854-201ENSMUST00000117839 446 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm6923-201ENSMUST00000118343 406 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm13482-201ENSMUST00000119842 254 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm22452-201ENSMUST00000122804 104 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm23172-201ENSMUST00000157160 124 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm22098-201ENSMUST00000157930 85 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm24837-201ENSMUST00000158683 81 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.35□□□□□ -2.19
Trav5d-4Q5R1F6 Gm17062-201ENSMUST00000166987 461 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms