Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm2033-201ENSMUST00000210753 2287 ntBASIC7.47□□□□□ -1.21
Trim41Q5NCC3 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.21
Trim41Q5NCC3 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm14551-201ENSMUST00000120802 256 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm25177-201ENSMUST00000122634 117 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm25220-201ENSMUST00000157546 95 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm25162-201ENSMUST00000158906 159 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm24666-201ENSMUST00000158937 167 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm2862-201ENSMUST00000161524 328 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm29308-201ENSMUST00000188863 315 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm28537-201ENSMUST00000189026 315 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm29631-201ENSMUST00000191065 315 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm4644-201ENSMUST00000197587 400 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm44594-201ENSMUST00000208982 407 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm25411-201ENSMUST00000083760 151 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm42616-201ENSMUST00000198989 4184 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Gm44230-201ENSMUST00000203032 3550 ntBASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Trim41Q5NCC3 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Mir450b-201ENSMUST00000102095 82 ntBASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Mir669b-201ENSMUST00000102172 97 ntBASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Gm43649-201ENSMUST00000196596 391 ntBASIC7.45□□□□□ -1.22
Trim41Q5NCC3 AC133189.1-201ENSMUST00000198820 140 ntBASIC7.45□□□□□ -1.22
Trim41Q5NCC3 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Gm45445-201ENSMUST00000209586 232 ntBASIC7.45□□□□□ -1.22
Trim41Q5NCC3 AC165106.3-201ENSMUST00000228191 3843 ntBASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Gm6462-201ENSMUST00000081488 304 ntBASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim41Q5NCC3 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim41Q5NCC3 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim41Q5NCC3 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim41Q5NCC3 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim41Q5NCC3 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim41Q5NCC3 Gm22069-201ENSMUST00000179911 107 ntBASIC7.44□□□□□ -1.22
Trim41Q5NCC3 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC7.44□□□□□ -1.22
Trim41Q5NCC3 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim41Q5NCC3 Gm8288-201ENSMUST00000223406 593 ntBASIC7.44□□□□□ -1.22
Trim41Q5NCC3 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim41Q5NCC3 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
Trim41Q5NCC3 Gm37456-201ENSMUST00000193176 5837 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Mir676-201ENSMUST00000102443 89 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Gm24650-201ENSMUST00000157105 103 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Gm22215-201ENSMUST00000157558 96 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Gm22845-201ENSMUST00000157712 104 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Gm43220-201ENSMUST00000199299 282 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Gm44052-201ENSMUST00000203382 396 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 AC101945.3-201ENSMUST00000226568 153 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim41Q5NCC3 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Gm37900-201ENSMUST00000195510 3805 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Gm43829-201ENSMUST00000196191 3802 ntBASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim41Q5NCC3 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Gm12173-201ENSMUST00000117622 273 ntBASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Gm24054-201ENSMUST00000158619 105 ntBASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim41Q5NCC3 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Gm37791-201ENSMUST00000195081 286 ntBASIC7.42□□□□□ -1.22
Trim41Q5NCC3 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Gm24966-201ENSMUST00000082443 79 ntBASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Gm23518-201ENSMUST00000082835 153 ntBASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim41Q5NCC3 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Gm45066-201ENSMUST00000207528 2551 ntBASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Gm21032-201ENSMUST00000208108 2578 ntBASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Gm7135-202ENSMUST00000191257 1905 ntBASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Gm11471-201ENSMUST00000121824 198 ntBASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Gm26403-201ENSMUST00000158500 105 ntBASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Gm32381-201ENSMUST00000203192 476 ntBASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim41Q5NCC3 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trim41Q5NCC3 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms