Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
Usp28Q5I043 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Usp28Q5I043 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Usp28Q5I043 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm25876-201ENSMUST00000104329 119 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm13510-201ENSMUST00000118659 429 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm9225-201ENSMUST00000121921 836 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm12956-201ENSMUST00000122184 414 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm24478-201ENSMUST00000157439 158 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm24784-201ENSMUST00000157640 62 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm23476-201ENSMUST00000158881 274 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm17072-201ENSMUST00000166673 658 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm24757-201ENSMUST00000176987 371 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm24306-201ENSMUST00000180229 79 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm11392-201ENSMUST00000181419 710 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm27028-201ENSMUST00000182303 399 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm27582-201ENSMUST00000184084 126 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm29216-201ENSMUST00000187117 492 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.29□□□□□ -2.04
Usp28Q5I043 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm43245-201ENSMUST00000197603 468 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.29□□□□□ -2.04
Usp28Q5I043 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Usp28Q5I043 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Usp28Q5I043 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Usp28Q5I043 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm15175-201ENSMUST00000117629 132 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm14020-201ENSMUST00000118165 662 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm14366-201ENSMUST00000121970 730 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm23867-201ENSMUST00000122649 274 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm8207-201ENSMUST00000171204 502 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm24464-201ENSMUST00000179697 107 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm23190-201ENSMUST00000180307 64 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm27979-201ENSMUST00000185126 56 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm18185-201ENSMUST00000186725 667 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm43804-201ENSMUST00000198280 456 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm44477-201ENSMUST00000199661 110 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm44938-201ENSMUST00000208614 427 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.28□□□□□ -2.04
Usp28Q5I043 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Usp28Q5I043 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm24150-201ENSMUST00000082759 104 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm25411-201ENSMUST00000083760 151 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Usp28Q5I043 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.28□□□□□ -2.04
Usp28Q5I043 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm13880-201ENSMUST00000118421 474 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm14843-201ENSMUST00000119596 212 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm12876-201ENSMUST00000120975 408 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm15986-201ENSMUST00000122153 400 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm26275-201ENSMUST00000157101 268 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm25220-201ENSMUST00000157546 95 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm27443-201ENSMUST00000184660 98 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm27544-201ENSMUST00000185069 155 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm17906-201ENSMUST00000202480 901 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm45772-201ENSMUST00000212961 240 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.27□□□□□ -2.05
Usp28Q5I043 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Usp28Q5I043 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.27□□□□□ -2.05
Usp28Q5I043 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.27□□□□□ -2.05
Usp28Q5I043 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Usp28Q5I043 Gm12386-201ENSMUST00000117380 688 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm15266-201ENSMUST00000119635 255 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm14301-201ENSMUST00000120181 324 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 AA413626-201ENSMUST00000121125 494 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm22633-201ENSMUST00000179834 107 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm24264-201ENSMUST00000179835 94 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Mir7j-201ENSMUST00000184427 122 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Mir6371-201ENSMUST00000184470 111 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Mir496b-201ENSMUST00000184935 113 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 Gm28755-201ENSMUST00000185773 199 ntBASIC2.26□□□□□ -2.05
Usp28Q5I043 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 126.1 ms