Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 Gm14980-201ENSMUST00000121247 736 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 Gm22163-201ENSMUST00000158408 135 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.18□□□□□ -2.22
Ccdc88bQ4QRL3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.17□□□□□ -2.22
Ccdc88bQ4QRL3 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC1.17□□□□□ -2.22
Ccdc88bQ4QRL3 Gm44332-201ENSMUST00000203712 433 ntBASIC1.17□□□□□ -2.22
Ccdc88bQ4QRL3 Gm44058-201ENSMUST00000204335 467 ntBASIC1.17□□□□□ -2.22
Ccdc88bQ4QRL3 Gm29920-201ENSMUST00000206876 754 ntBASIC1.17□□□□□ -2.22
Ccdc88bQ4QRL3 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Ccdc88bQ4QRL3 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Ccdc88bQ4QRL3 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.16□□□□□ -2.22
Ccdc88bQ4QRL3 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.16□□□□□ -2.22
Ccdc88bQ4QRL3 Gm45313-201ENSMUST00000210584 178 ntBASIC1.16□□□□□ -2.22
Ccdc88bQ4QRL3 Gm18414-201ENSMUST00000210858 694 ntBASIC1.16□□□□□ -2.22
Ccdc88bQ4QRL3 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
Ccdc88bQ4QRL3 Gm16265-201ENSMUST00000134558 108 ntBASIC1.15□□□□□ -2.23
Ccdc88bQ4QRL3 Gm23053-201ENSMUST00000175136 96 ntBASIC1.15□□□□□ -2.23
Ccdc88bQ4QRL3 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC1.15□□□□□ -2.23
Ccdc88bQ4QRL3 Gm22418-201ENSMUST00000180326 107 ntBASIC1.15□□□□□ -2.23
Ccdc88bQ4QRL3 Gm18775-201ENSMUST00000190763 586 ntBASIC1.15□□□□□ -2.23
Ccdc88bQ4QRL3 Gm38060-201ENSMUST00000194822 464 ntBASIC1.15□□□□□ -2.23
Ccdc88bQ4QRL3 Gm44656-201ENSMUST00000208428 490 ntBASIC1.15□□□□□ -2.23
Ccdc88bQ4QRL3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Ccdc88bQ4QRL3 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
Ccdc88bQ4QRL3 Gm24777-201ENSMUST00000157644 107 ntBASIC1.14□□□□□ -2.23
Ccdc88bQ4QRL3 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Ccdc88bQ4QRL3 Gm37720-201ENSMUST00000195497 1241 ntBASIC1.14□□□□□ -2.23
Ccdc88bQ4QRL3 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.14□□□□□ -2.23
Ccdc88bQ4QRL3 Gm16331-201ENSMUST00000144274 498 ntBASIC1.13□□□□□ -2.23
Ccdc88bQ4QRL3 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Ccdc88bQ4QRL3 Gm26378-201ENSMUST00000179093 107 ntBASIC1.13□□□□□ -2.23
Ccdc88bQ4QRL3 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.13□□□□□ -2.23
Ccdc88bQ4QRL3 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.13□□□□□ -2.23
Ccdc88bQ4QRL3 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Ccdc88bQ4QRL3 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Ccdc88bQ4QRL3 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC1.12□□□□□ -2.23
Ccdc88bQ4QRL3 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.12□□□□□ -2.23
Ccdc88bQ4QRL3 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Ccdc88bQ4QRL3 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC1.12□□□□□ -2.23
Ccdc88bQ4QRL3 Gm19237-201ENSMUST00000205036 1132 ntBASIC1.12□□□□□ -2.23
Ccdc88bQ4QRL3 AC153936.1-201ENSMUST00000219874 395 ntBASIC1.12□□□□□ -2.23
Ccdc88bQ4QRL3 Gm19118-201ENSMUST00000222554 98 ntBASIC1.12□□□□□ -2.23
Ccdc88bQ4QRL3 Gm25683-201ENSMUST00000083940 131 ntBASIC1.12□□□□□ -2.23
Ccdc88bQ4QRL3 Gm11797-201ENSMUST00000121336 754 ntBASIC1.11□□□□□ -2.23
Ccdc88bQ4QRL3 Mir7077-201ENSMUST00000183991 57 ntBASIC1.11□□□□□ -2.23
Ccdc88bQ4QRL3 Gm21139-201ENSMUST00000186594 877 ntBASIC1.11□□□□□ -2.23
Ccdc88bQ4QRL3 AC151907.1-201ENSMUST00000228812 412 ntBASIC1.11□□□□□ -2.23
Ccdc88bQ4QRL3 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc88bQ4QRL3 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Ccdc88bQ4QRL3 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Ccdc88bQ4QRL3 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Ccdc88bQ4QRL3 Gm25520-201ENSMUST00000158389 118 ntBASIC1.1□□□□□ -2.23
Ccdc88bQ4QRL3 Mir7091-201ENSMUST00000184075 79 ntBASIC1.1□□□□□ -2.23
Ccdc88bQ4QRL3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.1□□□□□ -2.23
Ccdc88bQ4QRL3 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.1□□□□□ -2.23
Ccdc88bQ4QRL3 Gm23924-201ENSMUST00000082474 108 ntBASIC1.1□□□□□ -2.23
Ccdc88bQ4QRL3 Gm24319-201ENSMUST00000083389 107 ntBASIC1.1□□□□□ -2.23
Ccdc88bQ4QRL3 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Ccdc88bQ4QRL3 Gm23588-201ENSMUST00000157659 99 ntBASIC1.09□□□□□ -2.24
Ccdc88bQ4QRL3 Gm16038-201ENSMUST00000159317 193 ntBASIC1.09□□□□□ -2.24
Ccdc88bQ4QRL3 Gm27477-201ENSMUST00000184649 143 ntBASIC1.09□□□□□ -2.24
Ccdc88bQ4QRL3 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.09□□□□□ -2.24
Ccdc88bQ4QRL3 Gm18645-202ENSMUST00000212222 760 ntBASIC1.09□□□□□ -2.24
Ccdc88bQ4QRL3 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Ccdc88bQ4QRL3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Ccdc88bQ4QRL3 Gm11784-201ENSMUST00000118568 474 ntBASIC1.08□□□□□ -2.24
Ccdc88bQ4QRL3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.08□□□□□ -2.24
Ccdc88bQ4QRL3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.08□□□□□ -2.24
Ccdc88bQ4QRL3 Gm27722-201ENSMUST00000183908 76 ntBASIC1.08□□□□□ -2.24
Ccdc88bQ4QRL3 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.08□□□□□ -2.24
Ccdc88bQ4QRL3 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Ccdc88bQ4QRL3 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.07□□□□□ -2.24
Ccdc88bQ4QRL3 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.07□□□□□ -2.24
Ccdc88bQ4QRL3 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.07□□□□□ -2.24
Ccdc88bQ4QRL3 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
Ccdc88bQ4QRL3 Gm22270-201ENSMUST00000104034 132 ntBASIC1.06□□□□□ -2.24
Ccdc88bQ4QRL3 Gm23752-201ENSMUST00000157584 115 ntBASIC1.06□□□□□ -2.24
Ccdc88bQ4QRL3 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.06□□□□□ -2.24
Ccdc88bQ4QRL3 Gm14073-201ENSMUST00000117344 381 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm15215-201ENSMUST00000117773 489 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm2003-201ENSMUST00000118537 636 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm22482-201ENSMUST00000122563 359 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm37213-201ENSMUST00000193077 586 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm7726-201ENSMUST00000206241 231 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm45386-201ENSMUST00000210194 218 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm6272-201ENSMUST00000121256 171 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm42796-201ENSMUST00000199913 1087 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm44655-201ENSMUST00000207768 423 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 AC116395.1-201ENSMUST00000225480 1143 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.05□□□□□ -2.24
Ccdc88bQ4QRL3 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Ccdc88bQ4QRL3 Gm23429-201ENSMUST00000122486 149 ntBASIC1.04□□□□□ -2.24
Ccdc88bQ4QRL3 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.04□□□□□ -2.24
Ccdc88bQ4QRL3 Gm21754-201ENSMUST00000177550 479 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms