Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm22834-201ENSMUST00000102021 79 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Gm24787-201ENSMUST00000157380 123 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Gm26414-201ENSMUST00000157674 269 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Gm21754-201ENSMUST00000177550 479 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Gm43669-201ENSMUST00000198229 436 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Gm7039-201ENSMUST00000205138 346 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Gm23614-201ENSMUST00000082598 107 ntBASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Trim40Q3UWA4 Gm13504-201ENSMUST00000117490 316 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm12787-201ENSMUST00000119234 396 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm12617-201ENSMUST00000121268 381 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm15899-201ENSMUST00000128586 238 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm24553-201ENSMUST00000158653 131 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm15914-201ENSMUST00000161922 309 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm8114-201ENSMUST00000172225 484 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm20543-201ENSMUST00000174200 726 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm20794-201ENSMUST00000177626 628 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm21744-201ENSMUST00000178403 662 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm21171-201ENSMUST00000180048 673 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm23862-201ENSMUST00000180342 94 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm27845-201ENSMUST00000184479 114 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm28700-201ENSMUST00000187614 579 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm28843-201ENSMUST00000189198 678 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm29546-201ENSMUST00000191171 678 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm43402-201ENSMUST00000197159 159 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm43405-201ENSMUST00000198642 337 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Gm46312-201ENSMUST00000220961 420 ntBASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Trim40Q3UWA4 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Mir687-201ENSMUST00000102166 89 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm5287-201ENSMUST00000120666 598 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm24839-201ENSMUST00000122602 107 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm22277-201ENSMUST00000157204 277 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm23956-201ENSMUST00000157211 119 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm24475-201ENSMUST00000157435 143 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm25360-201ENSMUST00000178786 191 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Mir6907-201ENSMUST00000183764 71 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm27385-201ENSMUST00000184747 104 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm28414-201ENSMUST00000190111 294 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm38311-201ENSMUST00000192945 165 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm5001-201ENSMUST00000204361 331 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Trim40Q3UWA4 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Trim40Q3UWA4 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Trim40Q3UWA4 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm14013-201ENSMUST00000119006 270 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm11556-201ENSMUST00000120751 288 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm14629-201ENSMUST00000122428 144 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm25318-201ENSMUST00000122554 314 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm23980-201ENSMUST00000157135 158 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm26411-201ENSMUST00000157668 107 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm18520-201ENSMUST00000174783 658 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm20673-201ENSMUST00000177167 430 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm29184-201ENSMUST00000190038 334 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm28169-201ENSMUST00000190342 345 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trim40Q3UWA4 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Gm23515-201ENSMUST00000082829 107 ntBASIC2.46□□□□□ -2.02
Trim40Q3UWA4 Snord104-201ENSMUST00000083192 70 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms