Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Upf3aQ3ULJ3 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm12814-201ENSMUST00000117091 846 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm12697-201ENSMUST00000118008 667 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm8217-201ENSMUST00000119136 465 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm14428-201ENSMUST00000120408 822 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm14736-201ENSMUST00000121470 336 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm22236-201ENSMUST00000157093 106 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm24911-201ENSMUST00000157292 136 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Mir3964-201ENSMUST00000174898 74 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm17946-201ENSMUST00000186856 538 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm28474-201ENSMUST00000188501 315 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm18341-201ENSMUST00000197538 622 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Upf3aQ3ULJ3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm23010-201ENSMUST00000104151 126 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm11352-201ENSMUST00000119264 517 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm11785-201ENSMUST00000120165 601 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm23137-201ENSMUST00000157559 107 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm23559-201ENSMUST00000157824 103 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm24601-201ENSMUST00000157970 143 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Mir669n-201ENSMUST00000158636 54 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm3111-201ENSMUST00000167426 490 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm25156-201ENSMUST00000179809 79 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Mir6905-201ENSMUST00000184228 70 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm27443-201ENSMUST00000184660 98 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm28755-201ENSMUST00000185773 199 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm36984-201ENSMUST00000192770 235 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm37579-201ENSMUST00000194291 142 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm18160-201ENSMUST00000214279 827 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Gm23650-201ENSMUST00000083355 70 ntBASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Upf3aQ3ULJ3 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm15846-201ENSMUST00000116022 320 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm13356-201ENSMUST00000121678 335 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm23642-201ENSMUST00000157858 258 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm9593-201ENSMUST00000166034 469 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm22716-201ENSMUST00000177596 107 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Mir8106-201ENSMUST00000184520 139 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm29550-201ENSMUST00000185543 285 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm43193-201ENSMUST00000197732 441 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm43550-201ENSMUST00000200597 303 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm34701-202ENSMUST00000204685 360 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm45232-201ENSMUST00000207811 162 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Gm18703-201ENSMUST00000215318 333 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Upf3aQ3ULJ3 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms