Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm24153-201ENSMUST00000179280 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm25597-201ENSMUST00000179388 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm25816-201ENSMUST00000179764 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm26188-201ENSMUST00000179963 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm21729-201ENSMUST00000180058 664 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm21853-201ENSMUST00000180071 664 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm26433-201ENSMUST00000180227 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm22128-201ENSMUST00000180346 94 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir669a-7-201ENSMUST00000180364 87 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm27317-201ENSMUST00000183533 95 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir7013-201ENSMUST00000183540 72 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm27520-201ENSMUST00000184872 81 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm28900-201ENSMUST00000185232 156 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm29495-201ENSMUST00000189319 664 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir669a-6-201ENSMUST00000196127 87 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir669a-12-201ENSMUST00000197274 87 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir669a-5-201ENSMUST00000197439 87 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir669a-10-201ENSMUST00000197745 87 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir7118-201ENSMUST00000197760 61 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir669a-11-201ENSMUST00000197952 87 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir669a-4-201ENSMUST00000198665 87 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir669a-9-201ENSMUST00000200087 87 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Mir669a-8-201ENSMUST00000200268 87 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm45772-201ENSMUST00000212961 240 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm19441-201ENSMUST00000221545 330 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm26228-201ENSMUST00000082512 107 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm25080-201ENSMUST00000082526 107 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm26494-201ENSMUST00000083154 143 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm24493-201ENSMUST00000083805 143 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm25518-201ENSMUST00000083864 107 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.44□□□□□ -2.02
Trafd1Q3UDK1 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm13343-201ENSMUST00000116474 105 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm14069-201ENSMUST00000120815 229 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm12617-201ENSMUST00000121268 381 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm11849-201ENSMUST00000121293 261 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm25945-201ENSMUST00000122484 135 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm24475-201ENSMUST00000157435 143 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm23068-201ENSMUST00000158239 293 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm3852-201ENSMUST00000182781 264 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm6801-201ENSMUST00000190697 339 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm37743-201ENSMUST00000194645 376 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm44519-201ENSMUST00000206486 122 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm7692-201ENSMUST00000213534 409 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trafd1Q3UDK1 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Mir682-201ENSMUST00000102281 96 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm24670-201ENSMUST00000104154 132 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm25529-201ENSMUST00000104850 92 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm16354-201ENSMUST00000155376 150 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm25624-201ENSMUST00000157222 275 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm25392-201ENSMUST00000157335 297 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm24210-201ENSMUST00000158263 133 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm27313-201ENSMUST00000183500 142 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm44476-201ENSMUST00000196225 91 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm8041-201ENSMUST00000199755 616 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm25859-201ENSMUST00000083710 91 ntBASIC2.42□□□□□ -2.02
Trafd1Q3UDK1 Gm10343-201ENSMUST00000096279 348 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms