Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm25671-201ENSMUST00000178612 105 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm23307-201ENSMUST00000179167 105 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm23793-201ENSMUST00000179396 117 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm25286-201ENSMUST00000179790 105 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm37290-201ENSMUST00000195775 339 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm45814-201ENSMUST00000212646 775 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm23851-201ENSMUST00000083831 103 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm24522-201ENSMUST00000083964 108 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Gm10242-201ENSMUST00000090064 330 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ddb1Q3U1J4 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Gm12238-201ENSMUST00000127764 124 ntBASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Gm24577-201ENSMUST00000158580 63 ntBASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Gm17117-201ENSMUST00000163665 299 ntBASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Mir6338-201ENSMUST00000183389 109 ntBASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Gm44343-201ENSMUST00000196702 90 ntBASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Gm25929-201ENSMUST00000082784 107 ntBASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Gm25411-201ENSMUST00000083760 151 ntBASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ddb1Q3U1J4 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Mir743b-201ENSMUST00000104751 77 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm14578-201ENSMUST00000122166 391 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm24847-201ENSMUST00000158032 108 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm22891-201ENSMUST00000158641 164 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm25707-201ENSMUST00000175120 96 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm23963-201ENSMUST00000179603 77 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Mir7068-201ENSMUST00000183439 74 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm28008-201ENSMUST00000184021 186 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Mir8090-201ENSMUST00000185078 136 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Mir6375-201ENSMUST00000197176 95 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm43510-201ENSMUST00000197922 353 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm44825-201ENSMUST00000207557 150 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm44598-201ENSMUST00000207566 150 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 AC124549.2-201ENSMUST00000224243 222 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 AC117588.2-201ENSMUST00000228340 311 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ddb1Q3U1J4 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Gm13510-201ENSMUST00000118659 429 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Gm17072-201ENSMUST00000166673 658 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Gm29602-201ENSMUST00000186887 442 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Gm9696-202ENSMUST00000191541 830 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Gm37029-201ENSMUST00000195773 239 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Gm6012-201ENSMUST00000210821 730 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.02□□□□□ -1.77
Ddb1Q3U1J4 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms