Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm25815-201ENSMUST00000082755 107 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm26071-201ENSMUST00000083261 107 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm24521-201ENSMUST00000083958 107 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col8a1Q00780 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm42946-201ENSMUST00000196108 2570 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.46□□□□□ -1.85
Col8a1Q00780 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.46□□□□□ -1.85
Col8a1Q00780 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col8a1Q00780 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm26500-201ENSMUST00000101867 106 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm26140-201ENSMUST00000103807 110 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm25765-201ENSMUST00000104100 132 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm14973-201ENSMUST00000117248 255 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm11367-201ENSMUST00000117802 120 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm11718-201ENSMUST00000119942 537 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm10059-201ENSMUST00000131139 171 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm25615-201ENSMUST00000177836 94 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Mir6917-201ENSMUST00000184111 61 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Mir6372-201ENSMUST00000185114 109 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm29022-201ENSMUST00000190702 225 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm32222-201ENSMUST00000203296 298 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm44099-201ENSMUST00000203299 112 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm44208-201ENSMUST00000205199 421 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm46138-201ENSMUST00000215294 426 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm26457-201ENSMUST00000082678 78 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm24705-201ENSMUST00000082808 107 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Mir202-201ENSMUST00000083568 72 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col8a1Q00780 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col8a1Q00780 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.46□□□□□ -1.86
Col8a1Q00780 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col8a1Q00780 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col8a1Q00780 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col8a1Q00780 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Col8a1Q00780 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.45□□□□□ -1.86
Col8a1Q00780 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col8a1Q00780 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col8a1Q00780 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Col8a1Q00780 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm11785-201ENSMUST00000120165 601 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm26026-201ENSMUST00000122726 123 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm24008-201ENSMUST00000157733 138 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm22537-201ENSMUST00000158172 199 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm25447-201ENSMUST00000158997 128 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Mir5129-201ENSMUST00000174938 78 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm22398-201ENSMUST00000174941 125 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm25731-201ENSMUST00000175167 125 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Mir669k-201ENSMUST00000177742 127 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm25673-201ENSMUST00000179957 127 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm1833-201ENSMUST00000191608 682 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm43649-201ENSMUST00000196596 391 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm43028-201ENSMUST00000202561 481 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm44010-201ENSMUST00000204432 331 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm25204-201ENSMUST00000082843 106 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm23138-201ENSMUST00000083365 103 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
Col8a1Q00780 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
Col8a1Q00780 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col8a1Q00780 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.45□□□□□ -1.86
Col8a1Q00780 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Col8a1Q00780 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Col8a1Q00780 Gm25938-201ENSMUST00000104139 166 ntBASIC3.44□□□□□ -1.86
Col8a1Q00780 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms