Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SgcbP82349 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.84□□□□□ -1.8
SgcbP82349 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.8
SgcbP82349 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SgcbP82349 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SgcbP82349 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SgcbP82349 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SgcbP82349 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SgcbP82349 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.84□□□□□ -1.8
SgcbP82349 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SgcbP82349 Gm37329-201ENSMUST00000192973 2057 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SgcbP82349 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SgcbP82349 Mir761-201ENSMUST00000103245 76 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
SgcbP82349 Gm24605-201ENSMUST00000104772 96 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Gm12760-201ENSMUST00000117861 482 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Gm23905-201ENSMUST00000157568 109 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SgcbP82349 Gm27220-201ENSMUST00000183453 262 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.83□□□□□ -1.8
SgcbP82349 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.83□□□□□ -1.8
SgcbP82349 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SgcbP82349 Gm44879-201ENSMUST00000207007 503 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Gm3086-202ENSMUST00000221248 310 ntBASIC3.83□□□□□ -1.8
SgcbP82349 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.83□□□□□ -1.8
SgcbP82349 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.83□□□□□ -1.8
SgcbP82349 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Snord14d-201ENSMUST00000083424 86 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Mir302d-201ENSMUST00000083513 66 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Mir383-201ENSMUST00000083523 70 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Mir346-201ENSMUST00000083547 98 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SgcbP82349 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SgcbP82349 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SgcbP82349 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SgcbP82349 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Gm5117-201ENSMUST00000178878 2553 ntBASIC3.83□□□□□ -1.8
SgcbP82349 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC3.83□□□□□ -1.8
SgcbP82349 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SgcbP82349 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SgcbP82349 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
SgcbP82349 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SgcbP82349 Gm23319-201ENSMUST00000104467 131 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Mir1b-201ENSMUST00000117012 122 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm15936-201ENSMUST00000118706 460 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SgcbP82349 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.82□□□□□ -1.8
SgcbP82349 Gm22968-201ENSMUST00000157955 118 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm24905-201ENSMUST00000158129 104 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm22767-201ENSMUST00000158365 165 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm22531-201ENSMUST00000158819 140 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SgcbP82349 Mir3058-201ENSMUST00000175126 91 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Mir6960-201ENSMUST00000183449 61 ntBASIC3.82□□□□□ -1.8
SgcbP82349 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SgcbP82349 Gm28304-201ENSMUST00000185977 312 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm29256-201ENSMUST00000189094 312 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm28484-201ENSMUST00000190606 312 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm43649-201ENSMUST00000196596 391 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm23370-202ENSMUST00000197008 129 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.82□□□□□ -1.8
SgcbP82349 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.82□□□□□ -1.8
SgcbP82349 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Snord22-201ENSMUST00000083153 126 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.82□□□□□ -1.8
SgcbP82349 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SgcbP82349 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SgcbP82349 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SgcbP82349 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SgcbP82349 Gm16332-201ENSMUST00000134229 2967 ntBASIC3.81□□□□□ -1.8
SgcbP82349 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.81□□□□□ -1.8
SgcbP82349 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
SgcbP82349 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SgcbP82349 Gm15714-201ENSMUST00000117168 250 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Gm12550-201ENSMUST00000118478 329 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Gm25321-201ENSMUST00000122558 102 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Gm23331-201ENSMUST00000157423 108 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Gm24959-201ENSMUST00000157924 146 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Gm24131-201ENSMUST00000158539 107 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.81□□□□□ -1.8
SgcbP82349 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SgcbP82349 Gm29428-201ENSMUST00000190086 409 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.81□□□□□ -1.8
SgcbP82349 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.81□□□□□ -1.8
SgcbP82349 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.81□□□□□ -1.8
SgcbP82349 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.81□□□□□ -1.8
SgcbP82349 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Gm24966-201ENSMUST00000082443 79 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Gm23099-201ENSMUST00000083454 139 ntBASIC3.81□□□□□ -1.8
SgcbP82349 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.81□□□□□ -1.8
SgcbP82349 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SgcbP82349 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.81□□□□□ -1.8
SgcbP82349 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SgcbP82349 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms