Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm22443-201ENSMUST00000082890 107 ntBASIC2.1□□□□□ -2.07
Ufd1P70362 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Ufd1P70362 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ufd1P70362 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ufd1P70362 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ufd1P70362 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ufd1P70362 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ufd1P70362 Gm14352-201ENSMUST00000119250 449 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Gm14656-201ENSMUST00000120342 502 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Gm14739-201ENSMUST00000120424 802 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Gm15799-201ENSMUST00000120899 289 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Gm8532-201ENSMUST00000179174 461 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Mir6370-201ENSMUST00000183510 120 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Gm28825-201ENSMUST00000186233 238 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.09□□□□□ -2.07
Ufd1P70362 Gm37771-201ENSMUST00000193121 265 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Gm42509-201ENSMUST00000197390 781 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.09□□□□□ -2.07
Ufd1P70362 Gm42739-201ENSMUST00000200687 226 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Gm44459-201ENSMUST00000203926 160 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ufd1P70362 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ufd1P70362 Snord38a-201ENSMUST00000083746 71 ntBASIC2.09□□□□□ -2.07
Ufd1P70362 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ufd1P70362 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.09□□□□□ -2.08
Ufd1P70362 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.09□□□□□ -2.08
Ufd1P70362 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.09□□□□□ -2.08
Ufd1P70362 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ufd1P70362 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ufd1P70362 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ufd1P70362 Gm12053-201ENSMUST00000119022 252 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm12071-201ENSMUST00000121968 469 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.08□□□□□ -2.08
Ufd1P70362 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.08□□□□□ -2.08
Ufd1P70362 Gm23752-201ENSMUST00000157584 115 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm22083-201ENSMUST00000157586 102 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm22382-201ENSMUST00000158185 130 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ufd1P70362 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ufd1P70362 Gm23862-201ENSMUST00000180342 94 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm11392-201ENSMUST00000181419 710 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm29073-201ENSMUST00000185563 664 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm28838-201ENSMUST00000186338 315 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm29635-201ENSMUST00000187221 315 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm29026-201ENSMUST00000187787 315 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm28797-201ENSMUST00000188543 315 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm28855-201ENSMUST00000188680 315 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm28705-201ENSMUST00000189548 315 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm28939-201ENSMUST00000190351 315 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm28223-201ENSMUST00000190469 315 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.08□□□□□ -2.08
Ufd1P70362 Gm29165-201ENSMUST00000190655 664 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm29092-201ENSMUST00000190768 315 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm29211-201ENSMUST00000191470 664 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm18296-201ENSMUST00000192475 783 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm42925-201ENSMUST00000197359 285 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC2.08□□□□□ -2.08
Ufd1P70362 Gm45513-201ENSMUST00000210228 376 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.08□□□□□ -2.08
Ufd1P70362 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Gm23517-201ENSMUST00000082830 192 ntBASIC2.08□□□□□ -2.08
Ufd1P70362 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ufd1P70362 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Ufd1P70362 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.08□□□□□ -2.08
Ufd1P70362 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Ufd1P70362 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
Ufd1P70362 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm12806-201ENSMUST00000119384 268 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.07□□□□□ -2.08
Ufd1P70362 Mir1942-201ENSMUST00000157274 63 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm23713-201ENSMUST00000157353 70 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm22615-201ENSMUST00000158102 70 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm22668-201ENSMUST00000158716 260 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.07□□□□□ -2.08
Ufd1P70362 Gm28404-201ENSMUST00000190242 453 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm28951-201ENSMUST00000190742 313 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.07□□□□□ -2.08
Ufd1P70362 Gm32033-201ENSMUST00000193483 339 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm45240-201ENSMUST00000211437 674 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm45879-201ENSMUST00000212521 392 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 AC116726.2-201ENSMUST00000217629 986 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Gm19118-201ENSMUST00000222554 98 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Ufd1P70362 Mir30d-201ENSMUST00000083503 82 ntBASIC2.07□□□□□ -2.08
Ufd1P70362 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Ufd1P70362 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms