Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm25264-201ENSMUST00000158519 117 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm22135-201ENSMUST00000158752 108 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm25024-201ENSMUST00000179667 104 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm6842-201ENSMUST00000211361 390 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm24152-201ENSMUST00000082764 163 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm22294-201ENSMUST00000083308 104 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm22744-201ENSMUST00000083444 65 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Sf3b6P59708 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Sf3b6P59708 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sf3b6P59708 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.65□□□□□ -1.83
Sf3b6P59708 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Sf3b6P59708 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
Sf3b6P59708 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sf3b6P59708 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
Sf3b6P59708 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Gm22321-201ENSMUST00000157152 104 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Gm22538-201ENSMUST00000158169 299 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.64□□□□□ -1.83
Sf3b6P59708 Gm16289-201ENSMUST00000162079 183 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Mir7031-201ENSMUST00000183860 65 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Gm27445-201ENSMUST00000184484 72 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Gm27414-201ENSMUST00000185033 381 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.64□□□□□ -1.83
Sf3b6P59708 Gm43604-201ENSMUST00000199799 705 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.64□□□□□ -1.83
Sf3b6P59708 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Gm25147-201ENSMUST00000083030 105 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sf3b6P59708 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Sf3b6P59708 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sf3b6P59708 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.64□□□□□ -1.83
Sf3b6P59708 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Sf3b6P59708 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Sf3b6P59708 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm23578-201ENSMUST00000103943 104 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Mdga2-203ENSMUST00000113942 423 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm12427-201ENSMUST00000117719 302 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Trav20-201ENSMUST00000142754 347 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm26279-201ENSMUST00000157095 102 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm22766-201ENSMUST00000158372 99 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm6660-201ENSMUST00000179149 468 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm27875-201ENSMUST00000184425 123 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Mir6540-201ENSMUST00000184886 108 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm28848-201ENSMUST00000189984 168 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm37836-201ENSMUST00000195875 175 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm45002-201ENSMUST00000208045 120 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm45687-201ENSMUST00000209454 155 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sf3b6P59708 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm10298-201ENSMUST00000074801 265 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Gm22868-201ENSMUST00000083955 164 ntBASIC3.63□□□□□ -1.83
Sf3b6P59708 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sf3b6P59708 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm24121-201ENSMUST00000102029 106 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm24116-201ENSMUST00000103975 107 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm25726-201ENSMUST00000104529 129 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Mir872-201ENSMUST00000104728 81 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm13432-201ENSMUST00000118861 241 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm5396-201ENSMUST00000121222 532 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm14916-201ENSMUST00000121904 204 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm23982-201ENSMUST00000157141 106 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm23171-201ENSMUST00000157159 264 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm22560-201ENSMUST00000157332 120 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm24006-201ENSMUST00000158462 132 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Mir6963-201ENSMUST00000183535 71 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm7065-201ENSMUST00000222150 474 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sf3b6P59708 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm23928-201ENSMUST00000082469 145 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm24817-201ENSMUST00000093672 105 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.62□□□□□ -1.83
Sf3b6P59708 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sf3b6P59708 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Sf3b6P59708 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.61□□□□□ -1.83
Sf3b6P59708 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Sf3b6P59708 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sf3b6P59708 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms