Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.51□□□□□ -2.17
Cdx2P43241 Gm7984-201ENSMUST00000060640 538 ntBASIC1.51□□□□□ -2.17
Cdx2P43241 Gm5670-201ENSMUST00000093546 372 ntBASIC1.51□□□□□ -2.17
Cdx2P43241 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
Cdx2P43241 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.51□□□□□ -2.17
Cdx2P43241 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm23691-201ENSMUST00000101878 107 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm22149-201ENSMUST00000104442 136 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Mir873a-201ENSMUST00000104863 77 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm23336-201ENSMUST00000117023 123 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm7164-201ENSMUST00000117503 450 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.5□□□□□ -2.17
Cdx2P43241 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm22843-201ENSMUST00000157710 134 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm20794-201ENSMUST00000177626 628 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm21885-201ENSMUST00000178891 327 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm27894-201ENSMUST00000184177 92 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm28356-202ENSMUST00000187566 858 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm20885-201ENSMUST00000190192 654 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm33571-201ENSMUST00000193271 657 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm36866-201ENSMUST00000193343 657 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm36047-201ENSMUST00000193659 657 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm20857-201ENSMUST00000194766 657 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm20858-201ENSMUST00000195459 657 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm30638-201ENSMUST00000195570 656 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm43708-201ENSMUST00000198857 961 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm43659-201ENSMUST00000200894 628 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.5□□□□□ -2.17
Cdx2P43241 Gm18729-201ENSMUST00000217230 621 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm24406-201ENSMUST00000083026 128 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm22740-201ENSMUST00000083439 109 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Mir301-201ENSMUST00000083655 86 ntBASIC1.5□□□□□ -2.17
Cdx2P43241 Gm2348-201ENSMUST00000108782 300 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Cdx2P43241 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cdx2P43241 Gm14358-201ENSMUST00000118458 403 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Gm14915-201ENSMUST00000120747 204 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Gm22386-201ENSMUST00000158192 129 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Gm24222-201ENSMUST00000158834 93 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Gm2930-201ENSMUST00000170403 474 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC1.49□□□□□ -2.17
Cdx2P43241 Gm18964-201ENSMUST00000193013 563 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.49□□□□□ -2.17
Cdx2P43241 Gm43978-201ENSMUST00000203491 451 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Gm44794-201ENSMUST00000206550 411 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Gm9318-201ENSMUST00000222444 438 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Cdx2P43241 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Cdx2P43241 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.49□□□□□ -2.17
Cdx2P43241 Gm23060-201ENSMUST00000102345 109 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm11268-201ENSMUST00000118347 267 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm13510-201ENSMUST00000118659 429 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm23122-201ENSMUST00000157645 103 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm23558-201ENSMUST00000157823 80 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Cdx2P43241 Mir3968-201ENSMUST00000175355 100 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm28200-201ENSMUST00000187778 315 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm29378-201ENSMUST00000188723 315 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm28909-201ENSMUST00000189406 315 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm37987-201ENSMUST00000194999 825 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Mir6962-201ENSMUST00000199512 63 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm43171-201ENSMUST00000199882 291 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.48□□□□□ -2.17
Cdx2P43241 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Cdx2P43241 AC154692.1-201ENSMUST00000228314 544 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cdx2P43241 Gm26055-201ENSMUST00000083038 107 ntBASIC1.48□□□□□ -2.17
Cdx2P43241 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Cdx2P43241 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
Cdx2P43241 Gm12765-201ENSMUST00000117273 615 ntBASIC1.47□□□□□ -2.17
Cdx2P43241 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.47□□□□□ -2.17
Cdx2P43241 Gm25658-201ENSMUST00000158472 128 ntBASIC1.47□□□□□ -2.17
Cdx2P43241 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Cdx2P43241 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Cdx2P43241 Mir6411-201ENSMUST00000183556 108 ntBASIC1.47□□□□□ -2.17
Cdx2P43241 Gm37000-201ENSMUST00000193058 428 ntBASIC1.47□□□□□ -2.17
Cdx2P43241 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Cdx2P43241 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms