Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC0.62□□□□□ -2.31
HttP42859 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC0.62□□□□□ -2.31
HttP42859 Gm17038-201ENSMUST00000166586 494 ntBASIC0.62□□□□□ -2.31
HttP42859 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
HttP42859 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC0.61□□□□□ -2.31
HttP42859 Gm14537-201ENSMUST00000117464 599 ntBASIC0.61□□□□□ -2.31
HttP42859 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.61□□□□□ -2.31
HttP42859 Gm12006-201ENSMUST00000120786 403 ntBASIC0.61□□□□□ -2.31
HttP42859 Gm17528-201ENSMUST00000171026 239 ntBASIC0.61□□□□□ -2.31
HttP42859 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.61□□□□□ -2.31
HttP42859 Gm11854-201ENSMUST00000117839 446 ntBASIC0.61□□□□□ -2.31
HttP42859 Mup-ps1-201ENSMUST00000120720 544 ntBASIC0.61□□□□□ -2.31
HttP42859 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC0.61□□□□□ -2.31
HttP42859 Gm17100-201ENSMUST00000168963 272 ntBASIC0.61□□□□□ -2.31
HttP42859 Mup-ps8-201ENSMUST00000178663 545 ntBASIC0.61□□□□□ -2.31
HttP42859 Mup-ps6-201ENSMUST00000179564 545 ntBASIC0.61□□□□□ -2.31
HttP42859 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC0.61□□□□□ -2.31
HttP42859 Mir224-201ENSMUST00000083608 82 ntBASIC0.61□□□□□ -2.31
HttP42859 Gm22839-201ENSMUST00000158436 304 ntBASIC0.6□□□□□ -2.31
HttP42859 Mir3089-201ENSMUST00000175350 84 ntBASIC0.6□□□□□ -2.31
HttP42859 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.6□□□□□ -2.31
HttP42859 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
HttP42859 Gm6591-201ENSMUST00000121063 434 ntBASIC0.6□□□□□ -2.31
HttP42859 Gm12096-201ENSMUST00000121149 829 ntBASIC0.6□□□□□ -2.31
HttP42859 Gm37319-201ENSMUST00000193500 636 ntBASIC0.6□□□□□ -2.31
HttP42859 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
HttP42859 Gm13359-201ENSMUST00000119000 695 ntBASIC0.6□□□□□ -2.31
HttP42859 Gm27427-201ENSMUST00000185134 193 ntBASIC0.6□□□□□ -2.31
HttP42859 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
HttP42859 Gm23452-201ENSMUST00000083327 107 ntBASIC0.6□□□□□ -2.31
HttP42859 Gm24549-201ENSMUST00000158647 139 ntBASIC0.59□□□□□ -2.31
HttP42859 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
HttP42859 Gm2005-201ENSMUST00000120759 542 ntBASIC0.59□□□□□ -2.32
HttP42859 Gm1989-201ENSMUST00000126244 636 ntBASIC0.59□□□□□ -2.32
HttP42859 Mir5099-201ENSMUST00000175257 74 ntBASIC0.59□□□□□ -2.32
HttP42859 Gm26236-201ENSMUST00000175536 137 ntBASIC0.59□□□□□ -2.32
HttP42859 Gm14915-201ENSMUST00000120747 204 ntBASIC0.58□□□□□ -2.32
HttP42859 Gm44909-201ENSMUST00000208756 165 ntBASIC0.58□□□□□ -2.32
HttP42859 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
HttP42859 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
HttP42859 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.58□□□□□ -2.32
HttP42859 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC0.58□□□□□ -2.32
HttP42859 Gm13901-201ENSMUST00000137252 468 ntBASIC0.58□□□□□ -2.32
HttP42859 Mir5136-201ENSMUST00000175573 76 ntBASIC0.58□□□□□ -2.32
HttP42859 Gm28647-201ENSMUST00000188416 197 ntBASIC0.58□□□□□ -2.32
HttP42859 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
HttP42859 Gm23969-201ENSMUST00000083324 74 ntBASIC0.58□□□□□ -2.32
HttP42859 Gm22036-201ENSMUST00000157279 215 ntBASIC0.58□□□□□ -2.32
HttP42859 Gm44720-201ENSMUST00000206076 260 ntBASIC0.58□□□□□ -2.32
HttP42859 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.58□□□□□ -2.32
HttP42859 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.58□□□□□ -2.32
HttP42859 Gm38104-201ENSMUST00000195121 1895 ntBASIC0.57□□□□□ -2.32
HttP42859 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
HttP42859 Gm14761-201ENSMUST00000121363 262 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
HttP42859 Gm36974-201ENSMUST00000194200 1071 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm35736-201ENSMUST00000203681 313 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.57□□□□□ -2.32
HttP42859 n-R5s197-201ENSMUST00000083302 119 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
HttP42859 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC0.57□□□□□ -2.32
HttP42859 Gm21737-201ENSMUST00000178112 664 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm21729-201ENSMUST00000180058 664 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm21853-201ENSMUST00000180071 664 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm20901-201ENSMUST00000180177 664 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm29073-201ENSMUST00000185563 664 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm29495-201ENSMUST00000189319 664 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm28090-201ENSMUST00000189458 664 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm21647-201ENSMUST00000189755 664 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm29165-201ENSMUST00000190655 664 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm29211-201ENSMUST00000191470 664 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm36891-201ENSMUST00000191995 655 ntBASIC0.57□□□□□ -2.32
HttP42859 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.57□□□□□ -2.32
HttP42859 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
HttP42859 Gm13085-201ENSMUST00000118356 171 ntBASIC0.56□□□□□ -2.32
HttP42859 Gm25949-201ENSMUST00000175333 114 ntBASIC0.56□□□□□ -2.32
HttP42859 Gm23190-201ENSMUST00000180307 64 ntBASIC0.56□□□□□ -2.32
HttP42859 Gm28453-203ENSMUST00000187041 189 ntBASIC0.56□□□□□ -2.32
HttP42859 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC0.56□□□□□ -2.32
HttP42859 Gm28912-201ENSMUST00000189001 234 ntBASIC0.56□□□□□ -2.32
HttP42859 Gm28408-201ENSMUST00000191557 463 ntBASIC0.56□□□□□ -2.32
HttP42859 Gm37431-201ENSMUST00000195102 111 ntBASIC0.56□□□□□ -2.32
HttP42859 Gm44828-201ENSMUST00000203745 106 ntBASIC0.56□□□□□ -2.32
HttP42859 Gm25683-201ENSMUST00000083940 131 ntBASIC0.56□□□□□ -2.32
HttP42859 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
HttP42859 Gm25966-201ENSMUST00000157169 117 ntBASIC0.56□□□□□ -2.32
HttP42859 Gm22425-201ENSMUST00000158532 138 ntBASIC0.56□□□□□ -2.32
HttP42859 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
HttP42859 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
HttP42859 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
HttP42859 Mir873a-201ENSMUST00000104863 77 ntBASIC0.55□□□□□ -2.32
HttP42859 Gm28169-201ENSMUST00000190342 345 ntBASIC0.55□□□□□ -2.32
HttP42859 Gm44182-201ENSMUST00000204052 115 ntBASIC0.55□□□□□ -2.32
HttP42859 AC122295.1-201ENSMUST00000223476 388 ntBASIC0.55□□□□□ -2.32
HttP42859 Mir151-201ENSMUST00000083678 68 ntBASIC0.55□□□□□ -2.32
HttP42859 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC0.55□□□□□ -2.32
HttP42859 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
HttP42859 Gm29550-201ENSMUST00000185543 285 ntBASIC0.55□□□□□ -2.32
HttP42859 Igkv11-114-201ENSMUST00000200013 346 ntBASIC0.55□□□□□ -2.32
HttP42859 Gm9373-201ENSMUST00000208724 599 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms