Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm43193-201ENSMUST00000197732 441 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm43600-201ENSMUST00000202134 223 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm44524-201ENSMUST00000203899 271 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm44903-201ENSMUST00000206840 130 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Gm6796-201ENSMUST00000211919 243 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Traf1P39428 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Traf1P39428 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Traf1P39428 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Traf1P39428 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.98□□□□□ -1.93
Traf1P39428 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Traf1P39428 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Traf1P39428 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Traf1P39428 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Traf1P39428 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Gm22270-201ENSMUST00000104034 132 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Gm14602-201ENSMUST00000118625 340 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Gm14366-201ENSMUST00000121970 730 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Gm22985-201ENSMUST00000122754 116 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Gm22534-201ENSMUST00000158173 104 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Traf1P39428 Mir496b-201ENSMUST00000184935 113 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Gm18964-201ENSMUST00000193013 563 ntBASIC2.97□□□□□ -1.93
Traf1P39428 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Traf1P39428 Gm44060-201ENSMUST00000204440 410 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Gm45879-201ENSMUST00000212521 392 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Gm7692-201ENSMUST00000213534 409 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.97□□□□□ -1.93
Traf1P39428 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.97□□□□□ -1.93
Traf1P39428 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Traf1P39428 Mir127-201ENSMUST00000093568 70 ntBASIC2.97□□□□□ -1.93
Traf1P39428 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Traf1P39428 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.96□□□□□ -1.93
Traf1P39428 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Traf1P39428 Gm23956-201ENSMUST00000157211 119 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm24908-201ENSMUST00000157294 127 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm26411-201ENSMUST00000157668 107 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm8580-201ENSMUST00000160295 464 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm17062-201ENSMUST00000166987 461 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm24082-201ENSMUST00000175175 83 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Mir3103-201ENSMUST00000175474 67 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm20058-201ENSMUST00000186939 284 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm29335-201ENSMUST00000188361 459 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm38238-201ENSMUST00000194334 346 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm37037-201ENSMUST00000194475 424 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm2676-201ENSMUST00000207279 606 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Traf1P39428 Gm26494-201ENSMUST00000083154 143 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm24493-201ENSMUST00000083805 143 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Gm23042-201ENSMUST00000083866 101 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Mir452-201ENSMUST00000093629 85 ntBASIC2.96□□□□□ -1.94
Traf1P39428 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Traf1P39428 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Gm23803-201ENSMUST00000104610 132 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Gm15846-201ENSMUST00000116022 320 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Gm6954-201ENSMUST00000117416 225 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Gm26256-201ENSMUST00000122499 186 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.95□□□□□ -1.94
Traf1P39428 Gm19140-201ENSMUST00000209790 421 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Gm45366-201ENSMUST00000209828 384 ntBASIC2.95□□□□□ -1.94
Traf1P39428 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.95□□□□□ -1.94
Traf1P39428 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.95□□□□□ -1.94
Traf1P39428 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.95□□□□□ -1.94
Traf1P39428 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Gm24035-201ENSMUST00000082867 107 ntBASIC2.95□□□□□ -1.94
Traf1P39428 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Traf1P39428 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.95□□□□□ -1.94
Traf1P39428 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Traf1P39428 Gm381-201ENSMUST00000117443 2037 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm22831-201ENSMUST00000102473 109 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
Traf1P39428 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Traf1P39428 Gm14558-201ENSMUST00000117458 381 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm14638-201ENSMUST00000121338 216 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
Traf1P39428 Gm16533-201ENSMUST00000140035 228 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm24716-201ENSMUST00000157524 104 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm24780-201ENSMUST00000157635 143 ntBASIC2.94□□□□□ -1.94
Traf1P39428 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm28399-201ENSMUST00000186221 318 ntBASIC2.94□□□□□ -1.94
Traf1P39428 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Traf1P39428 Gm28572-201ENSMUST00000187444 318 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm28169-201ENSMUST00000190342 345 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm37455-201ENSMUST00000191993 529 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm19694-201ENSMUST00000192364 505 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Traf1P39428 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Traf1P39428 Gm44256-201ENSMUST00000203304 335 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm44519-201ENSMUST00000206486 122 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm44818-201ENSMUST00000206608 358 ntBASIC2.94□□□□□ -1.94
Traf1P39428 Gm45445-201ENSMUST00000209586 232 ntBASIC2.94□□□□□ -1.94
Traf1P39428 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.94□□□□□ -1.94
Traf1P39428 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms