Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm24839-201ENSMUST00000122602 107 ntBASIC2.1□□□□□ -2.07
P20040 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
P20040 Mir3075-201ENSMUST00000175340 85 ntBASIC2.1□□□□□ -2.07
P20040 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
P20040 Gm11395-201ENSMUST00000181011 499 ntBASIC2.1□□□□□ -2.07
P20040 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.1□□□□□ -2.07
P20040 Gm5329-201ENSMUST00000186898 463 ntBASIC2.1□□□□□ -2.07
P20040 Gm28744-201ENSMUST00000189939 340 ntBASIC2.1□□□□□ -2.07
P20040 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
P20040 Gm28169-201ENSMUST00000190342 345 ntBASIC2.1□□□□□ -2.07
P20040 Gm7837-201ENSMUST00000190873 412 ntBASIC2.1□□□□□ -2.07
P20040 Gm38238-201ENSMUST00000194334 346 ntBASIC2.1□□□□□ -2.07
P20040 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.1□□□□□ -2.07
P20040 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
P20040 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
P20040 Gm17890-201ENSMUST00000221419 757 ntBASIC2.1□□□□□ -2.07
P20040 Gm46389-201ENSMUST00000223199 392 ntBASIC2.1□□□□□ -2.07
P20040 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
P20040 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
P20040 Gm26446-201ENSMUST00000082455 103 ntBASIC2.1□□□□□ -2.07
P20040 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.1□□□□□ -2.07
P20040 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.1□□□□□ -2.07
P20040 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
P20040 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.09□□□□□ -2.07
P20040 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.09□□□□□ -2.07
P20040 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
P20040 Gm23803-201ENSMUST00000104610 132 ntBASIC2.09□□□□□ -2.07
P20040 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
P20040 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
P20040 Gm23956-201ENSMUST00000157211 119 ntBASIC2.09□□□□□ -2.07
P20040 Gm24075-201ENSMUST00000158175 72 ntBASIC2.09□□□□□ -2.07
P20040 Gm24878-201ENSMUST00000158782 104 ntBASIC2.09□□□□□ -2.07
P20040 Gm8114-201ENSMUST00000172225 484 ntBASIC2.09□□□□□ -2.07
P20040 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
P20040 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.09□□□□□ -2.07
P20040 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
P20040 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC2.09□□□□□ -2.07
P20040 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
P20040 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.09□□□□□ -2.07
P20040 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
P20040 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.09□□□□□ -2.07
P20040 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.09□□□□□ -2.07
P20040 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.09□□□□□ -2.07
P20040 Gm8940-201ENSMUST00000212585 219 ntBASIC2.09□□□□□ -2.07
P20040 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.09□□□□□ -2.07
P20040 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.09□□□□□ -2.07
P20040 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.09□□□□□ -2.07
P20040 Gm10298-201ENSMUST00000074801 265 ntBASIC2.09□□□□□ -2.07
P20040 Gm23042-201ENSMUST00000083866 101 ntBASIC2.09□□□□□ -2.07
P20040 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
P20040 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
P20040 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
P20040 Gm650-201ENSMUST00000144428 1551 ntBASIC2.09□□□□□ -2.08
P20040 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.09□□□□□ -2.08
P20040 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
P20040 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
P20040 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
P20040 Gm13756-201ENSMUST00000117618 222 ntBASIC2.08□□□□□ -2.08
P20040 Gm14652-201ENSMUST00000118479 235 ntBASIC2.08□□□□□ -2.08
P20040 Gm26280-201ENSMUST00000157096 101 ntBASIC2.08□□□□□ -2.08
P20040 Gm22083-201ENSMUST00000157586 102 ntBASIC2.08□□□□□ -2.08
P20040 Gm22483-201ENSMUST00000157986 274 ntBASIC2.08□□□□□ -2.08
P20040 Gm25866-201ENSMUST00000158245 112 ntBASIC2.08□□□□□ -2.08
P20040 Gm24212-201ENSMUST00000158258 132 ntBASIC2.08□□□□□ -2.08
P20040 Gm3111-201ENSMUST00000167426 490 ntBASIC2.08□□□□□ -2.08
P20040 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC2.08□□□□□ -2.08
P20040 Gm3852-201ENSMUST00000182781 264 ntBASIC2.08□□□□□ -2.08
P20040 Gm29013-201ENSMUST00000187431 237 ntBASIC2.08□□□□□ -2.08
P20040 Gm19193-201ENSMUST00000190263 590 ntBASIC2.08□□□□□ -2.08
P20040 Gm35212-201ENSMUST00000196672 606 ntBASIC2.08□□□□□ -2.08
P20040 Gm23370-202ENSMUST00000197008 129 ntBASIC2.08□□□□□ -2.08
P20040 Gm42164-201ENSMUST00000198881 379 ntBASIC2.08□□□□□ -2.08
P20040 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
P20040 Gm44459-201ENSMUST00000203926 160 ntBASIC2.08□□□□□ -2.08
P20040 Gm44830-201ENSMUST00000207667 584 ntBASIC2.08□□□□□ -2.08
P20040 Gm45344-201ENSMUST00000211610 341 ntBASIC2.08□□□□□ -2.08
P20040 Gm6796-201ENSMUST00000211919 243 ntBASIC2.08□□□□□ -2.08
P20040 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.08□□□□□ -2.08
P20040 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
P20040 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
P20040 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
P20040 Gm24313-201ENSMUST00000082561 133 ntBASIC2.08□□□□□ -2.08
P20040 Gm25796-201ENSMUST00000082645 163 ntBASIC2.08□□□□□ -2.08
P20040 Gm26166-201ENSMUST00000083788 107 ntBASIC2.08□□□□□ -2.08
P20040 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
P20040 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
P20040 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
P20040 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.07□□□□□ -2.08
P20040 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.07□□□□□ -2.08
P20040 Gm14558-201ENSMUST00000117458 381 ntBASIC2.07□□□□□ -2.08
P20040 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.07□□□□□ -2.08
P20040 Gm23885-201ENSMUST00000122682 294 ntBASIC2.07□□□□□ -2.08
P20040 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.07□□□□□ -2.08
P20040 Gm22038-201ENSMUST00000157277 242 ntBASIC2.07□□□□□ -2.08
P20040 Gm22733-201ENSMUST00000158094 91 ntBASIC2.07□□□□□ -2.08
P20040 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
P20040 Gm22633-201ENSMUST00000179834 107 ntBASIC2.07□□□□□ -2.08
P20040 Gm29550-201ENSMUST00000185543 285 ntBASIC2.07□□□□□ -2.08
P20040 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.07□□□□□ -2.08
P20040 Gm28825-201ENSMUST00000186233 238 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms