Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.86□□□□□ -1.95
Msh3P13705 Gm43264-201ENSMUST00000202284 325 ntBASIC2.86□□□□□ -1.95
Msh3P13705 Gm45879-201ENSMUST00000212521 392 ntBASIC2.86□□□□□ -1.95
Msh3P13705 Gm7495-201ENSMUST00000215099 426 ntBASIC2.86□□□□□ -1.95
Msh3P13705 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Msh3P13705 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.86□□□□□ -1.95
Msh3P13705 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.86□□□□□ -1.95
Msh3P13705 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.86□□□□□ -1.95
Msh3P13705 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.86□□□□□ -1.95
Msh3P13705 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Msh3P13705 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Msh3P13705 Gm22936-201ENSMUST00000103955 126 ntBASIC2.85□□□□□ -1.95
Msh3P13705 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm15106-201ENSMUST00000119691 821 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm11420-201ENSMUST00000120047 402 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm14736-201ENSMUST00000121470 336 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.85□□□□□ -1.95
Msh3P13705 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.85□□□□□ -1.95
Msh3P13705 Gm13901-201ENSMUST00000137252 468 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.85□□□□□ -1.95
Msh3P13705 Gm25220-201ENSMUST00000157546 95 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm24086-201ENSMUST00000175171 98 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm37455-201ENSMUST00000191993 529 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm44726-201ENSMUST00000203427 217 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm44718-201ENSMUST00000206886 359 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm19140-201ENSMUST00000209790 421 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.85□□□□□ -1.95
Msh3P13705 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.85□□□□□ -1.95
Msh3P13705 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.85□□□□□ -1.95
Msh3P13705 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm22507-201ENSMUST00000082773 160 ntBASIC2.85□□□□□ -1.95
Msh3P13705 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.85□□□□□ -1.95
Msh3P13705 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Msh3P13705 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Msh3P13705 Gm25728-201ENSMUST00000104525 159 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.84□□□□□ -1.95
Msh3P13705 Gm23704-201ENSMUST00000158844 340 ntBASIC2.84□□□□□ -1.95
Msh3P13705 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
Msh3P13705 Gm25243-201ENSMUST00000174912 207 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Gm19932-201ENSMUST00000177033 313 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Gm25314-201ENSMUST00000178810 79 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Gm27921-201ENSMUST00000183968 108 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Mir6335-201ENSMUST00000184081 98 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Mir6405-201ENSMUST00000184584 124 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Gm29429-201ENSMUST00000187071 121 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Gm44600-201ENSMUST00000208540 111 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.84□□□□□ -1.95
Msh3P13705 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.84□□□□□ -1.95
Msh3P13705 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Msh3P13705 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.84□□□□□ -1.95
Msh3P13705 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
Msh3P13705 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.84□□□□□ -1.96
Msh3P13705 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Msh3P13705 Gm26341-201ENSMUST00000104561 134 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm12386-201ENSMUST00000117380 688 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm13541-201ENSMUST00000119519 283 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm12213-201ENSMUST00000119924 353 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm13210-201ENSMUST00000121483 273 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm15065-201ENSMUST00000121699 273 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.83□□□□□ -1.96
Msh3P13705 Gm23470-201ENSMUST00000157129 120 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm24436-201ENSMUST00000157889 302 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm23523-201ENSMUST00000180190 107 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm23862-201ENSMUST00000180342 94 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Msh3P13705 Gm27379-201ENSMUST00000183730 123 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm27527-201ENSMUST00000183903 99 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm29134-201ENSMUST00000186579 126 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm28337-201ENSMUST00000190425 666 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm36866-201ENSMUST00000193343 657 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm36047-201ENSMUST00000193659 657 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm20857-201ENSMUST00000194766 657 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm20858-201ENSMUST00000195459 657 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm42647-201ENSMUST00000195939 459 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Msh3P13705 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.83□□□□□ -1.96
Msh3P13705 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.83□□□□□ -1.96
Msh3P13705 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.83□□□□□ -1.96
Msh3P13705 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.83□□□□□ -1.96
Msh3P13705 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Msh3P13705 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Msh3P13705 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Msh3P13705 Gm10025-201ENSMUST00000079568 372 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gm22249-201ENSMUST00000082485 136 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Olfr895-201ENSMUST00000093864 951 ntBASIC2.83□□□□□ -1.96
Msh3P13705 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Msh3P13705 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Msh3P13705 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Msh3P13705 Gm13331-201ENSMUST00000117500 448 ntBASIC2.82□□□□□ -1.96
Msh3P13705 Gm13862-201ENSMUST00000121220 197 ntBASIC2.82□□□□□ -1.96
Msh3P13705 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.82□□□□□ -1.96
Msh3P13705 Gm26275-201ENSMUST00000157101 268 ntBASIC2.82□□□□□ -1.96
Msh3P13705 Gm24958-201ENSMUST00000158009 97 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms