Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm28314-201ENSMUST00000191276 345 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.46□□□□□ -1.7
Msx1P13297 Gm46138-201ENSMUST00000215294 426 ntBASIC4.46□□□□□ -1.7
Msx1P13297 CT009696.2-201ENSMUST00000216668 432 ntBASIC4.46□□□□□ -1.7
Msx1P13297 AC120540.2-201ENSMUST00000221716 387 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.46□□□□□ -1.7
Msx1P13297 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Msx1P13297 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Msx1P13297 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.46□□□□□ -1.7
Msx1P13297 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Msx1P13297 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Msx1P13297 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.45□□□□□ -1.7
Msx1P13297 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.45□□□□□ -1.7
Msx1P13297 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Msx1P13297 Gm13756-201ENSMUST00000117618 222 ntBASIC4.45□□□□□ -1.7
Msx1P13297 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.45□□□□□ -1.7
Msx1P13297 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.45□□□□□ -1.7
Msx1P13297 Gm23905-201ENSMUST00000157568 109 ntBASIC4.45□□□□□ -1.7
Msx1P13297 Gm26828-201ENSMUST00000180640 172 ntBASIC4.45□□□□□ -1.7
Msx1P13297 Gm43680-201ENSMUST00000199466 340 ntBASIC4.45□□□□□ -1.7
Msx1P13297 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Msx1P13297 Gm7117-201ENSMUST00000071515 387 ntBASIC4.45□□□□□ -1.7
Msx1P13297 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.45□□□□□ -1.7
Msx1P13297 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
Msx1P13297 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Msx1P13297 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Msx1P13297 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Msx1P13297 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Msx1P13297 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Msx1P13297 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
Msx1P13297 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Msx1P13297 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Msx1P13297 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Msx1P13297 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Msx1P13297 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Msx1P13297 Gm24544-201ENSMUST00000103862 110 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.44□□□□□ -1.7
Msx1P13297 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.44□□□□□ -1.7
Msx1P13297 Gm24650-201ENSMUST00000157105 103 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Gm24690-201ENSMUST00000157759 97 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Msx1P13297 Gm37545-201ENSMUST00000186512 148 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Msx1P13297 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.44□□□□□ -1.7
Msx1P13297 Gm42844-201ENSMUST00000200355 112 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Gm44054-201ENSMUST00000203814 372 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Gm44650-201ENSMUST00000206929 194 ntBASIC4.44□□□□□ -1.7
Msx1P13297 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Msx1P13297 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Gm24355-201ENSMUST00000082858 122 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.44□□□□□ -1.7
Msx1P13297 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Msx1P13297 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Msx1P13297 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Msx1P13297 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Gm37061-201ENSMUST00000195066 3243 ntBASIC4.44□□□□□ -1.7
Msx1P13297 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Msx1P13297 Gm45393-201ENSMUST00000211634 2631 ntBASIC4.43□□□□□ -1.7
Msx1P13297 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.43□□□□□ -1.7
Msx1P13297 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Msx1P13297 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Msx1P13297 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.43□□□□□ -1.7
Msx1P13297 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.43□□□□□ -1.7
Msx1P13297 Gm22758-201ENSMUST00000102275 96 ntBASIC4.43□□□□□ -1.7
Msx1P13297 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Msx1P13297 Snord90-201ENSMUST00000104568 111 ntBASIC4.43□□□□□ -1.7
Msx1P13297 Gm12934-201ENSMUST00000119221 343 ntBASIC4.43□□□□□ -1.7
Msx1P13297 Gm24716-201ENSMUST00000157524 104 ntBASIC4.43□□□□□ -1.7
Msx1P13297 Gm25889-201ENSMUST00000157775 107 ntBASIC4.43□□□□□ -1.7
Msx1P13297 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Msx1P13297 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.43□□□□□ -1.7
Msx1P13297 Gm9251-201ENSMUST00000197202 628 ntBASIC4.43□□□□□ -1.7
Msx1P13297 Gm44429-201ENSMUST00000203542 186 ntBASIC4.43□□□□□ -1.7
Msx1P13297 Gm25409-201ENSMUST00000083764 131 ntBASIC4.43□□□□□ -1.7
Msx1P13297 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Msx1P13297 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Msx1P13297 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Msx1P13297 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Msx1P13297 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.43□□□□□ -1.7
Msx1P13297 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Msx1P13297 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Msx1P13297 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Msx1P13297 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Msx1P13297 Gm15745-201ENSMUST00000119807 115 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Gm14402-201ENSMUST00000122217 508 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Gm25444-201ENSMUST00000158999 113 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.42□□□□□ -1.7
Msx1P13297 Gm24086-201ENSMUST00000175171 98 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Msx1P13297 Gm27520-201ENSMUST00000184872 81 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Gm43604-201ENSMUST00000199799 705 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Msx1P13297 Snora52-201ENSMUST00000082732 137 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms